Pairwise Alignments

Query, 684 a.a., Superfamily I DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 723 a.a., DNA helicase II from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 1e-26
 Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 53/341 (15%)

Query: 197 LNPAQARAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLTTGEAVADQILLLAFGRKAAQE 256
           LN  Q  AV    ++LL+LAGAGSGKT VLV R  WL++  EA    ++ + F  KAA E
Sbjct: 11  LNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMAVTFTNKAAAE 70

Query: 257 MDERIQERLH--TRDITARTFHALALHIIQQ---GSKKVPSISKLENDAQARQALFIKTW 311
           M  RI+E +H     +   TFH +   I++     +K +     +++D Q R    +   
Sbjct: 71  MRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQQRLLKRL--- 127

Query: 312 RQQCSEKKAQAKGWRQWLEEELSWEVPEGSFWQDDKLARRLGSRLDRWVSLMRMHGGTQA 371
                  KA     +QW   +++W                       W++  +  G    
Sbjct: 128 ------IKAHNLDDKQWPARQVAW-----------------------WINNQKDEGLRPT 158

Query: 372 EMIESAPEAIRDLFSKRVKLMAPLLKAWKTALKEENAVDFSGLIHQAIIILE-----KGR 426
            +         + F    +    L  A++ A      VDF+ ++ +A+ +L      +  
Sbjct: 159 HI---------NAFDPVTQTYLKLYTAYQEACDRAGLVDFAEILLRALELLRGNQHIREH 209

Query: 427 FVSPWKHILVDEFQDISPQRAALLSALRAQNKHTSLFAVGDDWQAIYRFSGAQLSLTTAF 486
           + + +KHILVDEFQD +  + A L  +      +++  VGDD Q+IY + GA++     F
Sbjct: 210 YQARFKHILVDEFQDTNAIQYAWLRMM--AGAQSNVMIVGDDDQSIYGWRGARVENIEKF 267

Query: 487 HHYFGEGERSDLDTTYRFNSRIGEIANRFIQQNPHQLAKPL 527
              F       L+  YR    I E +N  I  N  ++ K L
Sbjct: 268 TREFPSVNTIRLEQNYRSTKTILEASNTLIANNSERMGKQL 308



 Score = 45.4 bits (106), Expect = 9e-09
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 544 DQLEPLLDKLSGYAKPDERILVLARYHHLKPAALEKAATRWPKLQ--LEFMTIHASKGQQ 601
           + LE L+     + KP+E   +      L  AALE    +  +    ++ MT+H++KG +
Sbjct: 507 ENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEAGEGQADEHDDAVQLMTLHSAKGLE 566

Query: 602 ADYVIVVGLKEGSDGFPAPARESVMEEALLPVPEDFPDAEERRLLYVALTRARHRVWLLF 661
              V +VG++EG      P++ S  E   L         EERRL YV +TRA  ++++ +
Sbjct: 567 FPLVFMVGVEEGM----FPSQMSAEEAGRL--------EEERRLCYVGMTRAMQKLYITY 614