Pairwise Alignments

Query, 684 a.a., Superfamily I DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 671 a.a., DNA helicase Rep from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 9e-27
 Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 48/360 (13%)

Query: 197 LNPAQARAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLTTGEAVADQILLLAFGRKAAQE 256
           LNP Q  AV       LVLAGAGSGKT V+  +  +L+      A  I  + F  KAA+E
Sbjct: 3   LNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNIAAVTFTNKAARE 62

Query: 257 MDERIQERL---HTRDITARTFHALALHIIQQGSKKVPSISKLENDAQARQALFIKTWRQ 313
           M ER+ + L    +R +   TFH L L+II++  K                AL +K    
Sbjct: 63  MKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFK----------------ALGLKAGFS 106

Query: 314 QCSEKKAQAKGWRQWLEEELSWEVPEGSFWQDDKLARRLGSRLDRWVSLMRMHGGTQAEM 373
              ++   A      L +EL+ +  +G    D  L R L S +  W + M          
Sbjct: 107 LFDDQDQLA------LLKELTEKQLDG----DKDLLRLLLSTISNWKNDML--------- 147

Query: 374 IESAPEAIRDLFSKRVKLMAPLLKAWKTALKEENAVDFSGLIHQAIIILEKG-----RFV 428
             + P+A      ++  L A   + ++  ++  NA+DF  LI   +++L        R+ 
Sbjct: 148 --TPPQAKAMAKGEQQLLFAHCFELYQKQMQSYNALDFDDLILLPVLLLRSNEEVRQRWQ 205

Query: 429 SPWKHILVDEFQDISPQRAALLSALRAQNKHTSLFAVGDDWQAIYRFSGAQLSLTTAFHH 488
           +  +++LVDE+QD +  +  L+  L  +     L  VGDD Q+IY + GA+         
Sbjct: 206 NRIRYLLVDEYQDTNTSQYELVKLLVGERGR--LTVVGDDDQSIYSWRGAKPQNLVLLGE 263

Query: 489 YFGEGERSDLDTTYRFNSRIGEIANRFIQQNPHQLAKPL-NSLRPGDKKAVTLLADDQLE 547
            F   +   L+  YR  SRI   AN  I  NPH   K L + L  G+K  V L  ++  E
Sbjct: 264 DFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQKALFSELAEGEKLKVILANNEDHE 323



 Score = 48.1 bits (113), Expect = 1e-09
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 25/108 (23%)

Query: 589 LEFMTIHASKGQQADYVIVVGLKEGSDGFPAPARESVMEEALLPVPEDFPDAEERRLLYV 648
           ++ MT+HASKG +  YV ++G +EG      P + S+ EE +          EERRL+YV
Sbjct: 554 VQLMTLHASKGLEFPYVYLIGAEEGI----LPHQTSIDEENV---------EEERRLMYV 600

Query: 649 ALTRARHRVWLLFNKE----------EPSAFVDILKSIDV--PVARKP 684
            +TRA+  +  +  KE            S F+D L   D+   V +KP
Sbjct: 601 GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKP 648