Pairwise Alignments

Query, 405 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

Subject, 415 a.a., transport transmembrane protein from Sinorhizobium meliloti 1021

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 10/212 (4%)

Query: 11  KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL--GVTGHSALNM-WSGLVFS-ITFLFSA 66
           +R L + +L  FL     ++++P LP Y+E+L     G +A++  W  LV+S + FLF+ 
Sbjct: 8   RRGLFLVFLILFLDIMGIAIIVPVLPTYLEELTGADIGEAAVDGGWLLLVYSAMQFLFA- 66

Query: 67  MASPFWGGLADRKGRKIMLLRSALGMAIIMALMGVAQNVWQFLILRALLGLLGGFIPNAN 126
              P  G L+DR GR+ +LL S L  A+   +  +A + W   I R+L G+ G     A+
Sbjct: 67  ---PLIGNLSDRFGRRPVLLASVLTFALDNLICALATSYWMLFIGRSLAGISGASFGTAS 123

Query: 127 ALIATQIPRHKSGWALGTLSTGGVSGALLGPLAGGLLADNYGLRPVFFITASVLFLCFIV 186
           A IA            G +     +G  LGP+ GG L +  G R  F+  A++ FL FI+
Sbjct: 124 AYIADVSDDENRAKNFGLIGIAFGTGFALGPVIGGFLGE-LGPRVPFYGAAALSFLNFIM 182

Query: 187 TLLCIRENFTPVAKKEM-LHAREVLTSLKNPR 217
            +  + E   P  ++    H    L +LK  R
Sbjct: 183 GVFLLPETLAPANRRRFEWHRANPLGALKQMR 214



 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 7/184 (3%)

Query: 220 LSLFVTTMIIQVATGSIAPILTLYVRDLAG-NVSNIAFISGLIASVPGVAALLSAPRLGK 278
           L LF+  M I +    I P+L  Y+ +L G ++   A   G +  V      L AP +G 
Sbjct: 16  LILFLDIMGIAI----IVPVLPTYLEELTGADIGEAAVDGGWLLLVYSAMQFLFAPLIGN 71

Query: 279 LGDRVGPEKILICALVISVLLLIPMSMVQTPWQLGVLRFLLGAADGALLPAVQTLLVYNS 338
           L DR G   +L+ +++   L  +  ++  + W L + R L G + GA        +   S
Sbjct: 72  LSDRFGRRPVLLASVLTFALDNLICALATSYWMLFIGRSLAGIS-GASFGTASAYIADVS 130

Query: 339 TNQIAGRIFSYNQSFRDIGNVTGPLLGAGISASFGFRAVFIVTAGVVLFNAIYSWFSLSR 398
            ++   + F         G   GP++G G     G R  F   A +   N I   F L  
Sbjct: 131 DDENRAKNFGLIGIAFGTGFALGPVIG-GFLGELGPRVPFYGAAALSFLNFIMGVFLLPE 189

Query: 399 ALRP 402
            L P
Sbjct: 190 TLAP 193