Pairwise Alignments

Query, 334 a.a., DNA polymerase III, delta' subunit from Enterobacter asburiae PDN3

Subject, 324 a.a., DNA polymerase III subunit delta' from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (361), Expect = 5e-39
 Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 14/317 (4%)

Query: 4   YPWLRPHFEQLIGSYQAGRGHHALLIQALPGMGDDALIYAITRFLMCQQPEGHKSCGKCR 63
           YPWL P ++       AG+   A LIQA  G+G ++L+  + R LMC   +  + CG C 
Sbjct: 8   YPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMARTLMCTSSQS-EPCGFCH 66

Query: 64  GCQLMQAGTHPDYYTLEPEKGKSALGIDAVREVSEKLYEHARLGGAKVVWLKDATLLTEA 123
            C LMQ+G HPD++ ++PEK   ++ ++ +R+++    E ++L G +++ ++ A  + E+
Sbjct: 67  SCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMNRIAQESSQLSGYRLIVIEPADAMNES 126

Query: 124 AANALLKTLEEPPVKTWFFLSCRDPGRLLATLRSRCRLHHLAVPQESWALSWLEREVTTS 183
           +ANALLKTLEEP     F L       LL T+ SRC+   L  P  +  + WL+ +  T+
Sbjct: 127 SANALLKTLEEPAPNCLFILVTSRIKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGITT 186

Query: 184 PESALTALRLSSGAPAAALALL---QPDVWSERET-LCRAVDTSLNSHDWLSLLPALNSD 239
           P     AL L + +P    A +     + + E E+ L  A+   +N+   L  +  +++D
Sbjct: 187 P---AYALHLCADSPLKTRAFMLEGGAEKYHELESQLMNALSGDVNAQ--LKCIALIDAD 241

Query: 240 RAVERLHWLASLLLDALKIQQRATLLTNPDAWPLVNTLANRLSGKILHAMLHEICQSREQ 299
                L+W+  +L DA KI         P   P    LA R +   LH     + +  EQ
Sbjct: 242 -LTTHLYWVWCVLTDAQKIHFGVQQDYYP---PASAALAGRFTYSKLHVQTASLERLMEQ 297

Query: 300 LLTVTGLNRELLLTDQL 316
           L   +GLN ELLL   L
Sbjct: 298 LNQFSGLNTELLLLQWL 314