Pairwise Alignments

Query, 301 a.a., GIY-YIG catalytic domain from Enterobacter asburiae PDN3

Subject, 762 a.a., excinuclease ABC, C subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 60/183 (32%), Positives = 89/183 (48%), Gaps = 19/183 (10%)

Query: 34  RPWLEALPKQPGVYIFHGESDTLPLYIGKSVNIRSRVLSHLR----------TPDEAAML 83
           +P +  +P  PGVY++   +  + LY+GK+ ++R R+ S+ R          TP   AML
Sbjct: 3   KPVMSNIPDTPGVYLYKDAAGRI-LYVGKAKHLRKRIASYFREAAEGAPPPQTPKTLAML 61

Query: 84  RQSRRITWFQTAGEMGALLLEARLIKEQQPLFNKRLRRNRQ--LCSLQINNGKPQVVYAR 141
           RQ+ R+    T  E  ALLLEA LIK+ +P +N  LR ++Q  L  LQ  +  P++   R
Sbjct: 62  RQAERLDTLSTTTEKEALLLEASLIKKHRPRYNIVLRDDKQYVLFRLQKKHPYPRLDIVR 121

Query: 142 DVDFSHAPNLYGLFANKRAALQALQTL--ADDLQLCYSLLGLEATTRGRACFRSALKRCA 199
            V    A   YG F +  AA    + +  A  L+ C     LE   R R C    + +C 
Sbjct: 122 AVRRDGA-QYYGPFTSAGAARATWKAIHRAFPLRRCTD-RALE--NRVRPCLYHFIGQCL 177

Query: 200 GAC 202
             C
Sbjct: 178 APC 180