Pairwise Alignments

Query, 301 a.a., GIY-YIG catalytic domain from Enterobacter asburiae PDN3

Subject, 486 a.a., DNA polymerase III, epsilon subunit from Marinobacter adhaerens HP15

 Score =  160 bits (405), Expect = 6e-44
 Identities = 102/264 (38%), Positives = 144/264 (54%), Gaps = 14/264 (5%)

Query: 30  PEHL-RPWLEALPKQPGVYIFHGESDTLPLYIGKSVNIRSRVLSHLRTPDEAA----MLR 84
           P HL    L+ LP+ PGVY F+GE+D L LY+GKS NI  RV SH      +A    M  
Sbjct: 194 PSHLPSDTLQDLPRGPGVYRFYGENDVL-LYVGKSTNIAQRVASHFSGDHNSARGVRMSE 252

Query: 85  QSRRITWFQTAGEMGALLLEARLIKEQQPLFNKRLRRNRQLCSLQINN---GKPQVVYAR 141
             RR+ W +TAGE+GALLLE + IK  +PLFN+R R  + L S++++    G  Q    R
Sbjct: 253 SLRRVEWTETAGELGALLLELKQIKTLKPLFNRRSRAAKNLVSIELSRNEAGYLQARLVR 312

Query: 142 DVDFSHAPNLYGLFANKRAALQALQTLADDLQLCYSLLGLEATTRGRACFRSALKRCAGA 201
           +++     + +GLF +KR A +AL  +A   +LC  LLGLE    G  CF+ AL RC GA
Sbjct: 313 EIEPHRLGDYFGLFRSKRDAERALSGIAAKNELCNRLLGLEPEHEG-PCFQRALGRCKGA 371

Query: 202 CCGKESVEAHHARLLTGLAAISVNCWPWESAVALKEVGE--AMTQYHIVNNWLWLGAVDD 259
           C   E+VE ++ R+      + +  WPW+  V + E  E    T   +V NW+ +  + +
Sbjct: 372 CEELENVERYNLRVQIAFHGLRLKTWPWKGPVGIVERDERSGRTDILVVYNWMHVATLHE 431

Query: 260 INDAA--TLLRTPAGFDHDGYKIL 281
               A  +L      FD D YK+L
Sbjct: 432 EEALADLSLSGQAVTFDLDSYKLL 455