Pairwise Alignments

Query, 230 a.a., DNA-binding HTH domain-containing proteins from Enterobacter asburiae PDN3

Subject, 260 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 69/252 (27%), Positives = 100/252 (39%), Gaps = 29/252 (11%)

Query: 4   TYYNDIAINTLIQSELDAFFEDFKGIVFAYAIMNKKD-----------PSQMRIINNSPE 52
           T  N    +  +   +D  FE  K I F   I +              PS +++ N S +
Sbjct: 7   TIRNQFTAHDTLDGRIDQVFEAMKSIGFEALIYDYTPVPRDLDGTIMVPSLLKLRNISED 66

Query: 53  WFDIYLDRKYQFIDPVIIRALRCVEDFFWESDVILSDGYNLTRIFNES---------VQY 103
             D + DR Y  IDPV   ALR    FFW  D    D   L R F             + 
Sbjct: 67  MHDYWFDRGYFRIDPVQQVALRTSTPFFWNYD---PDADTLIRRFMSDDTAPVARYLSER 123

Query: 104 DIYQGQTFPLH----DYLNNLVVLSVISPKHSGIDIEKYRPQFLSFLVQLHQKTLNLY-S 158
           D+  G T P+H    DY     V    +    G  + +Y   F       H+   +L+ +
Sbjct: 124 DMSTGVTVPVHMPRGDYATVTGVRFGGNRAFEGHAL-RYIADFNLLAHVFHEAAYSLFDA 182

Query: 159 QHQQKKNVFLSPRERQILKWVSAGKTYAEISVILSIAERTVKFHMGNVMKKLGVNNARHA 218
           Q        L+ RER+ L++ + G +  EIS I+  +  TV  H+    KKLG  N   A
Sbjct: 183 QAFNAGTARLTERERECLRYSAEGHSAKEISRIIHRSVPTVVMHLNAAAKKLGAKNRTQA 242

Query: 219 IKLGTELRLLDD 230
           +   T  RLL++
Sbjct: 243 VVRATHYRLLEE 254