Pairwise Alignments

Query, 535 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  392 bits (1006), Expect = e-113
 Identities = 217/525 (41%), Positives = 332/525 (63%), Gaps = 5/525 (0%)

Query: 3   VLSVENLTISYRTARQWREVVHNVSFTLGRGEMLAFVGESGSGKTTTAQAIIGLLADNAR 62
           +L V NL++S+ T     + V NVSF +  GE LA VGESGSGK+ +  A++ LL  NAR
Sbjct: 6   LLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNAR 65

Query: 63  -RDAGKISLNGEEISRWSAKRLDTLRGARISLVPQDPGNSLNPVKTIGVQVGEIIQLHQK 121
                 I   GEE+   +  ++  +RG RI ++ Q+P  SLNP   +GVQV E I+ H+ 
Sbjct: 66  IHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRN 125

Query: 122 VTRAQRDEQVLALLTKVGLSHPEQRMTQYPHQLSGGMKQRVLIAIAIALRPDVIVADEPT 181
           V++ Q  ++VL L   V L  P+    ++PH+ SGG  QR++IA+A+   PD+++ADEPT
Sbjct: 126 VSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILIADEPT 185

Query: 182 SALDVTVQKRILDLLDILRRESGTAVLFVTHDLALAAQRADRLLVFRDGEVQEQGNTADI 241
           +ALDVTVQ  +L L+  ++   G A+LF+THDL +    ADR+LV   G+V EQG+T  +
Sbjct: 186 TALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQGSTEQL 245

Query: 242 VRTPQHAYTRQLLSDL-QGQRLTIAPVAGRPLASPAIRARAISKQFSLGKGHQ-LQALDR 299
              P+H YTR L++ + +G +  +A  A   L +  IR + + K + + + +Q  +A+  
Sbjct: 246 FLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKG 305

Query: 300 VTFDVRRGSTHALVGESGSGKTTLARILLGFEQADSGQVIIDDIDATALSREARRQLRQK 359
           ++ ++++G T  +VGESGSGK+TL R L+G     +GQ+     D  ALS + R  L++ 
Sbjct: 306 ISLELKQGETLGIVGESGSGKSTLGRALIGL-LPSTGQIAFKGQDFRALSEKQRLALKKD 364

Query: 360 IQFVYQNPFASLDPRQTLFDIIEEP-LKNFSRLGKTERKLRVETVAQRVALPVELLTRTA 418
           IQ V+Q+P+ SL PR T+ +II E  L +   + K ER  R     + V L    + R  
Sbjct: 365 IQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSINRYP 424

Query: 419 RELSGGQRQRVAIARALILEPTILVLDEATSALDVTVQAQILALLQQLQQQLGLTYLFIT 478
            E SGGQRQR+AIARALILEP+ ++LDE TSALD +VQ  ++ LL+++Q++  + YLFI+
Sbjct: 425 HEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGYLFIS 484

Query: 479 HDLSTVRRIAHSVTVLRSGQVVEQGDVGTLFASPQNDYTRELIDA 523
           HDL+ V+ ++  V V++ GQV+EQG   ++F +PQ++YT++LI A
Sbjct: 485 HDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529



 Score =  162 bits (409), Expect = 4e-44
 Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 19/265 (7%)

Query: 274 SPAIRARAISKQFSLGKGHQLQALDRVTFDVRRGSTHALVGESGSGKTTLARILLGFEQA 333
           +P ++ R +S  F+   G  + A+  V+FD+R G T A+VGESGSGK+     L+     
Sbjct: 4   NPLLQVRNLSVSFTTNDG-VVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPK 62

Query: 334 DS-----------GQVIIDDIDATALSREARRQLRQKIQFVYQNPFASLDPRQTLFDIIE 382
           ++           G+ +++  D      + RR    +I  ++Q P  SL+P   +   + 
Sbjct: 63  NARIHPESSIMFEGEELLNKTDT-----QMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVA 117

Query: 383 EPLKNFSRLGKTERKLRVETVAQRVALPVE--LLTRTARELSGGQRQRVAIARALILEPT 440
           E ++    + + + K RV  + Q V LP       +   E SGGQ QR+ IA ALI EP 
Sbjct: 118 EAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPD 177

Query: 441 ILVLDEATSALDVTVQAQILALLQQLQQQLGLTYLFITHDLSTVRRIAHSVTVLRSGQVV 500
           IL+ DE T+ALDVTVQA++L L++++Q  +G+  LFITHDL  V+ +A  V V+  G VV
Sbjct: 178 ILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVV 237

Query: 501 EQGDVGTLFASPQNDYTRELIDAIP 525
           EQG    LF  P++DYTR LI++IP
Sbjct: 238 EQGSTEQLFLQPEHDYTRMLINSIP 262