Pairwise Alignments

Query, 535 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Enterobacter asburiae PDN3

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  395 bits (1016), Expect = e-114
 Identities = 223/567 (39%), Positives = 345/567 (60%), Gaps = 36/567 (6%)

Query: 1   MTVLSVENLTISYRTARQWREVVHNVSFTLGRGEMLAFVGESGSGKTTTAQAIIGLLADN 60
           M++L V+NL I Y +       V +++  + RGE++  VGESG+GK+T   A+I LL+  
Sbjct: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60

Query: 61  ARRDAGKISLNGEEISRWSAKRLDTLRGARISLVPQDPGNSLNPVKTIGVQVGEIIQLHQ 120
                G++ LNGE+IS  S + +  +RG++I  + QDP  SLNP+ T+  Q+ E I  + 
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 121 KVTRAQRDEQVLALLTKVGLSHPEQRMTQYPHQLSGGMKQRVLIAIAIALRPDVIVADEP 180
           +V+  +  ++ L+L+ +VG+  PE R+ QYPHQ SGGM+QRV+IAIA+A  PD+I+ADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 181 TSALDVTVQKRILDLLDILRRESGTAVLFVTHDLALAAQRADRLLVFRDGEVQEQGNTAD 240
           T+ALDV++Q +IL+L+  L +++    + VTHD+ + +   DR+ V   G++ E G TA 
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 241 IVRTPQHAYTRQLLSDL--QGQRLTIAPVAG------------------------RPLAS 274
           ++ TP+H YTR L+S +    ++L   P+                          R    
Sbjct: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300

Query: 275 PAIRARAISKQFSL------GKGHQLQALDRVTFDVRRGSTHALVGESGSGKTTLARILL 328
           P ++   ++ +F         +   +QA + V+F V  G T  LVGESGSGK+T+AR++ 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 329 GFEQADSGQVIIDDIDATAL-SREARRQLRQKIQFVYQNPFASLDPRQTLFDIIEEPLKN 387
           G  Q ++G+V  + ID TAL S   RR LR+++Q V+QNP+ S++PR  +FDII EP++ 
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIR- 419

Query: 388 FSRLGKTERKLR--VETVAQRVALPVELLTRTARELSGGQRQRVAIARALILEPTILVLD 445
           F +L ++E + R  V  + + V L      +   E SGGQRQR++IARAL   P +L+ D
Sbjct: 420 FHKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICD 479

Query: 446 EATSALDVTVQAQILALLQQLQQQLGLTYLFITHDLSTVRRIAHSVTVLRSGQVVEQGDV 505
           E TSALDV+VQAQIL LL+ LQ +L LT LFI+HDL  +R++   V V++ G ++E    
Sbjct: 480 EPTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPT 539

Query: 506 GTLFASPQNDYTRELIDAIPHFSPATE 532
             LF  PQ++Y+++LI  +P F+   E
Sbjct: 540 EQLFTDPQHEYSKKLISLMPEFTGLRE 566



 Score =  136 bits (343), Expect = 2e-36
 Identities = 80/246 (32%), Positives = 137/246 (55%), Gaps = 7/246 (2%)

Query: 296 ALDRVTFDVRRGSTHALVGESGSGKTTLARILLGFEQADS----GQVIIDDIDATALSRE 351
           A+  +T D++RG    +VGESG+GK+T+   ++           G+V ++    + LS +
Sbjct: 22  AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVYLNGEKISGLSPQ 81

Query: 352 ARRQLR-QKIQFVYQNPFASLDPRQTLFDIIEEPLKNFSRLGKTERKLRVETVAQRVALP 410
           A R++R  KI F++Q+P  SL+P  T+   + E +    ++   E   R  ++ ++V +P
Sbjct: 82  AMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAYQRALSLMKQVGIP 141

Query: 411 V--ELLTRTARELSGGQRQRVAIARALILEPTILVLDEATSALDVTVQAQILALLQQLQQ 468
                L +   + SGG RQRV IA AL  EP +++ DE T+ALDV++Q QIL L+++L +
Sbjct: 142 QPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCK 201

Query: 469 QLGLTYLFITHDLSTVRRIAHSVTVLRSGQVVEQGDVGTLFASPQNDYTRELIDAIPHFS 528
           +  +  + +THD+  V  +   V V+  G +VE G    +  +P++ YTR LI A+P   
Sbjct: 202 KNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPRSD 261

Query: 529 PATEEF 534
              + F
Sbjct: 262 RKLDRF 267