Pairwise Alignments

Query, 532 a.a., ABC-type dipeptide transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 534 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25-INTG

 Score =  484 bits (1246), Expect = e-141
 Identities = 239/512 (46%), Positives = 338/512 (66%), Gaps = 3/512 (0%)

Query: 13  SALLPAGAAWAANSDTLIYCSEASPESFNPQIASSGPSFVASSQVLYNRLINFDPVKNTP 72
           S L  A   +AA+  +L++CSE SP  F+    ++     A+ + LYNRL+ F+  +   
Sbjct: 14  SLLAAATMGYAADKKSLVFCSEGSPAGFDTAQYTTATDNDAA-EPLYNRLVEFEKGETGV 72

Query: 73  VSSLAESWTISPDGKTYTFALRKGVKFNSNKYFKPTRDFNADDVIFSVLRQKDPKHPYHN 132
           V +LA  W ISPDG TYTF LR+GVKF+SNK FKPTRDFNADDV+F+  R  D  HP+  
Sbjct: 73  VPALATKWDISPDGLTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTFNRMLDADHPFRK 132

Query: 133 VSQGNYEYFNDVGLDKLIQDVKKVDDYHVQFTLSEPNAAFLADWGMDFASILSAEYADAM 192
                + YFN + L+K I  V+K D + V  TL+  +AAF+ +  M FA+ILSAEYA+ +
Sbjct: 133 AYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSFAAILSAEYAEQL 192

Query: 193 LKKGTPENVDTWPIGTGPYVLQQYKVDSLIRYVANPNYWE-GEVPTKHLIFSITPNVETR 251
           LK G P +++  PIGTGP+V Q+Y+ DS IRYVAN  YW+  +V    LIF+I  +   R
Sbjct: 193 LKTGKPSDINQKPIGTGPFVFQRYQKDSQIRYVANKQYWDPSKVKLDQLIFAINTDASVR 252

Query: 252 LAKLQTNECQIIPAPSPVQFDAIKNNKDLTLHSVDALNVGYLAFNTEKKPFDNVLVRQAL 311
           + KL+  ECQ+   P P   DA+K + +L L +    N+GY+A+N   KPFD + VRQAL
Sbjct: 253 VQKLKAGECQVTLHPRPADVDALKADPNLQLLTKPGFNLGYIAYNVRHKPFDQLEVRQAL 312

Query: 312 NYATDKKAIVNAVFMGSGTVAKSPIPPNMLGFNKDLKDYSYDPEKAKALLKQAGLEKGAE 371
           + A +K++I+NAV+ G+G +A + +PP    ++  ++D +Y+PEKAK LLK AG+++G E
Sbjct: 313 DMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIQDAAYNPEKAKELLKAAGVKEGTE 372

Query: 372 VTLWSMPVQRPYNPNSRRIAEMIQSDWAKVGVKAKIVSYEWGEYLSGMRKGEHDSALFGW 431
           +TLW+MPVQRPYNPN++ +AEM+QSDWAK+G+K KIVSYEWGEY+   + GEHD +L GW
Sbjct: 373 ITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEYIKRTKNGEHDVSLIGW 432

Query: 432 MSDNGDPDNFADVLLGCNSIKTGSNAARWCDKGYDALVQKAKLTSSPAERAKLYGQAQEI 491
             DNGDPDN+   L  C++I  G+N + WCD  YD L+++AK+ +   +R  LY QAQ++
Sbjct: 433 TGDNGDPDNWLGTLYSCDAI-GGNNYSMWCDPAYDKLIKQAKVVTDREQRTVLYKQAQQL 491

Query: 492 FYQQAPWIALANGKTFYATRSNVTGYSVSLMG 523
             QQ P   +A+        + V G+ VS  G
Sbjct: 492 LKQQVPITPVAHSTVNQPLSAKVEGFKVSPFG 523