Pairwise Alignments

Query, 296 a.a., ABC-type antimicrobial peptide transport system, permease component from Enterobacter asburiae PDN3

Subject, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

 Score =  327 bits (838), Expect = 2e-94
 Identities = 164/293 (55%), Positives = 209/293 (71%), Gaps = 1/293 (0%)

Query: 4   DSVYSEKRTPGVLRTVWRKFYGDTTAMIGLYGCAGLVLLCVFGSWFAPYGIDQQFLGYQL 63
           DS+Y E+  P      WR F  +  AM GL+    + L+ +   W APY   Q      L
Sbjct: 4   DSIYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYD-PQMHSSVLL 62

Query: 64  LPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGAFVVTLAATICGLALGIFAGST 123
           LPPSW   G V +FLGTDDLGRD+LSRL+ G+  ++G A ++TL AT+ G  +G  AG T
Sbjct: 63  LPPSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMT 122

Query: 124 HGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPHLSHAMFAVWLAILPRIVRSVYSMVHD 183
            GL S+ LNHILDT++SIPSLLLAII VAF G    + + A+ LA++PR +RSVY  VH+
Sbjct: 123 KGLLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHN 182

Query: 184 ELEKEYVVAARLDGATTFNILWFAVLPNIAAGLVTEITRALSMAILDIAALGFLDLGAQL 243
           E+EK+YV+AARLDGA  F +LW ++ PNI   +V EIT ALS+AILDI ALGFL LGAQ 
Sbjct: 183 EVEKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQS 242

Query: 244 PSPEWGAMLGDALELIYVAPWTVMLPGAAIMVSVLLINLLGDGIRRAINAGVQ 296
           PS EWGAMLGD++ELIY+APWTV LPG AIM +V++INL+GDG R+A+NAGV+
Sbjct: 243 PSTEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALNAGVE 295