Pairwise Alignments

Query, 663 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 809 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  327 bits (839), Expect = 1e-93
 Identities = 200/570 (35%), Positives = 321/570 (56%), Gaps = 17/570 (2%)

Query: 104 RDLAQGLSFAEQVVSEANSVIVILDRHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSR 163
           +D A+   F++ +    +SV+ I DR   I+  N+   + TG +   +IG++   L  + 
Sbjct: 246 KDAAEIRKFSKAIEQSPSSVL-ICDRQWRIEFANQKFTQLTGYEAASIIGKHPGALGDND 304

Query: 164 SEAAASK---RNITGFFRNGSSYEVERWIKTRKGQRLF--LFRNKFVHSGSGKNEIFLIC 218
            E   S+   ++I    +    ++ E     R G+R +  L          G     ++ 
Sbjct: 305 IENRDSRHLWQSIRLQVQRVGVWQGEVNSVRRNGERFWEQLIVTPIKDEAGGTTGYLIL- 363

Query: 219 SGTDITEERRAQERLRVLANTDTITGLPNRNAIHDLISDAIDN--RGDTQVGVVYLDLDN 276
            G DI+  +R +++L   AN D +TGLPNR    D +  A+    R  T VGV++LDLDN
Sbjct: 364 -GEDISIRKRYEQQLLRQANYDILTGLPNRMLALDRLKLALAQARRESTLVGVMFLDLDN 422

Query: 277 FKKVNDAYGHMFGDQLLQAVALAILSCLDEEQVLARLGGDEFIVMATN-TSQGSLEAMAS 335
           FK +ND  GH  GD LL   A  I SCL     +ARLGGDEF+V+    T   +   +A 
Sbjct: 423 FKHINDTLGHDAGDNLLIEAARRISSCLRGTSTVARLGGDEFLVILPGLTGPEASSQVAE 482

Query: 336 RILTRLRQPFRIGLIEIYTGCSLGIALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVF 395
           RIL     P+ +   E++   S+GIA+ P   ++  +++++AD AMY AK  G+  F  F
Sbjct: 483 RILKTFSPPYILNGQEVFVTTSIGIAIFPTDSDNSGTLLQHADAAMYQAKHKGKSSFAHF 542

Query: 396 SPEMNQRVFEYLWLDTNLRKALDNDQLLIHYQPKI-TWRGEVRSLEALVRWQSPERGLIP 454
           +PEM +   E L +++++R+AL+  +  +++QP + T  G + S+EAL+RW +P  G++ 
Sbjct: 543 APEMTEVSHERLKMESSMRRALELKEFELYFQPIVNTDSGTLCSVEALLRWNNPAMGMVM 602

Query: 455 PLEFISYAEESGLIVPLGRWVMLDVVRQVAKWRDK-GINLRVAVNVSARQLADQTIFSDL 513
           P  FI  AEE+GLI P+G WV+L+  R    W++  G ++ ++VNVS RQ  D      +
Sbjct: 603 PDRFIPLAEETGLITPIGEWVLLEACRAAMGWKEATGKDIGISVNVSPRQFRDPGFTEAV 662

Query: 514 KQALKDLNFEYCPVDVELTESCLIENEELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLA 573
             AL         +++E+TE  +++N      +++Q  + G ++ +DDFGTGYS+LS L 
Sbjct: 663 MHALATSGLAPEQLELEITERLILDNSIETAEILRQLDKAGIRLSVDDFGTGYSALSYLK 722

Query: 574 RFPIDAIKLDQSFVRDIHKQSISQSLVRAIVAVAQALNLQVIAEGVENAKEDAFLTKNGV 633
            +P D +K+D+SFV+D+ K+    SLVRAI+ +A +L L+VIAEGVE   +  FL K G 
Sbjct: 723 SYPFDTLKIDKSFVQDVMKEPEDASLVRAIINMAHSLGLRVIAEGVEEEAQTHFLKKEGC 782

Query: 634 NERQGFLFAKPMPAAAFERWLKRYQARNQR 663
           +  QG+ +++P+PAA F+ WL    A N+R
Sbjct: 783 DFSQGYFYSRPLPAADFDAWL----ANNRR 808