Pairwise Alignments

Query, 846 a.a., Rhs element Vgr protein from Enterobacter asburiae PDN3

Subject, 669 a.a., type IV secretion protein Rhs from Pseudomonas fluorescens FW300-N2E3

 Score =  327 bits (837), Expect = 2e-93
 Identities = 222/664 (33%), Positives = 328/664 (49%), Gaps = 43/664 (6%)

Query: 19  LTGREAMSESFALTLTVLGTDARIDRSKLLGQPVTVTIPTQNLLTSRYVNGKITRVAVSA 78
           ++G E+++   + TL  L   A +  +  +   +T T+    L  +R  +  +  +    
Sbjct: 26  ISGEESLNALSSQTLNGLNDGASLTLTSAVASHITTTLHNDAL--TRPFDALVAEIRQLP 83

Query: 79  VELTGTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQ-VNVEDKLTGSY 137
            + T  RY   QL + P LW +    N R+FQ      IV T+   H   + + KLTGSY
Sbjct: 84  ADATAERY---QLVLRPWLWWLTLASNNRVFQNLATSDIVTTIFKAHGFTDFQLKLTGSY 140

Query: 138 RVWDYCVQYQESSLDFISRLMELEGIAYHFSHEADKHTLVLTDAATQHQPFSGYEVIPYH 197
              +YCVQY E+   F+SRL+E EGI + F+HE  KHTL+L D+     P      + Y 
Sbjct: 141 TPREYCVQYGETDFAFVSRLLEEEGIFWFFTHEDGKHTLMLGDSNDAFVPIPNGPKVTYL 200

Query: 198 QTPSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPNAWLFQAQQNPASPKPGSIDVYD 257
               G   +  GI    +      G+Y   DY+F  P+  L+   +  A P+     +Y+
Sbjct: 201 GQRMG-ERELHGIRSGQVCVQAVAGVYRATDYEFTTPSTSLYGQAEAVAGPR----SIYE 255

Query: 258 WPGRFVDKGHGEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGEYLV 317
            PG +  K  G+   + R +  + + ++    +    + PGH FTL      + N +++V
Sbjct: 256 HPGGYNAKARGDALTKQRVDGLRSQEKRFVGESDCRWLVPGHWFTLAGHDDPTLNIDWVV 315

Query: 318 TAAGYHFEENRYASGEGETIHRTDFTVIPSAVVYRPAQTTAWPRTYGPQTAKVVGPNGES 377
           TA  +    + Y         R  F  IP A  YRPA+ T  PR +  QTA VVG +GE 
Sbjct: 316 TAVTHEASHDSY---------RNRFDAIPKATPYRPARITPKPRMH-TQTALVVGKSGEE 365

Query: 378 IWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGD 437
           IWTD+YGR+K++F WDR  K D++SSCWVRV   W+G+G+G   +PR+G EV+V FI+GD
Sbjct: 366 IWTDQYGRIKLQFPWDRDGKNDESSSCWVRVVLPWSGKGFGMQFVPRIGQEVIVTFIDGD 425

Query: 438 PDRPIITGRVYNDASMPPWALPAAATQMGFMSR-SKGGSVDNANALRFEDKAGAEQVWIQ 496
           PDRP++TG VYN  +  P+ALPA  TQ G  +  SKGG  D  N LRFEDK  AE+V++Q
Sbjct: 426 PDRPLVTGCVYNGDNALPYALPANQTQSGIKTHSSKGG--DGFNELRFEDKKDAEEVFLQ 483

Query: 497 AERNMDTSVKNDETHSVGGARSHYVKKNELHRVEANQTQAVKGGTEILTGKGKLDASVEQ 556
           A+++   +V ND T SVG         +E+  V+  +T+ VK G E +T    L+     
Sbjct: 484 AQKDFKINVLNDTTASVG--------HDEILTVKNARTRTVKEGDETVT----LEKGKRS 531

Query: 557 YVIASGTKLRLVSGESAIELNANGKINLIGKEFNFFVEGDGYITTGGKLHLNTSGTKPGT 616
             I +G+    V     +++ A+ K +  G  +   V GD  +T  G L +  SGT    
Sbjct: 532 VTIQTGSDSLDVKDSRTVKVGADQK-HSTGGNYEHKVTGDYSLTVDGNLTIKVSGTLTLQ 590

Query: 617 TAPGSGHKGDIDAAVQA------KFTPGKENKAGAAASAPAEASKTATPPASNAPSSGYG 670
           +      K   D A QA      K      N+AG   +  A  S T     S     G  
Sbjct: 591 SGGSFAIKSGADLAAQASTSISQKAGTSLSNQAGTELTNKAGTSLTNDAGVSLTNKGGAE 650

Query: 671 KDVD 674
           + VD
Sbjct: 651 QTVD 654