Pairwise Alignments

Query, 846 a.a., Rhs element Vgr protein from Enterobacter asburiae PDN3

Subject, 1017 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  277 bits (709), Expect = 2e-78
 Identities = 200/657 (30%), Positives = 326/657 (49%), Gaps = 48/657 (7%)

Query: 4   RITVQLPVEGLLFWKLT-----GREAMSES---------FALTLTVLGTDARIDRSKLLG 49
           R+  QL V+GL    L      G+E++S+S         F   + +    + +   + + 
Sbjct: 3   RLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVD 62

Query: 50  QPVTVTIPTQNLLTSRYVNGKITRVAVSAVELTGTRYAVYQLTVEPDLWPMKRDRNLRIF 109
           Q   +TI     +  + +NG + +++      TG R+  Y LT+ P L  +    N RIF
Sbjct: 63  QTAHLTILRDGQVVQQ-INGIVRQLSKGD---TGHRHTFYSLTLVPALERLSLRSNSRIF 118

Query: 110 QGQTVPQIVKTLLGEHQVNVEDKLTGSYRVW---DYCVQYQESSLDFISRLMELEGIAYH 166
           Q Q+VP+I+  LL E  + +ED      R     ++CVQY+E+ L F+ R+   EG+ Y 
Sbjct: 119 QQQSVPEIISILLQE--MGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYS 176

Query: 167 FSHEADKHTLVLTDAATQHQPFSGYEVIPYHQTPSGGSTDEEGISQWALEDSVTPGIYSL 226
             HEA KHTL+ TD++      +  + +PY+   +GG  +   +     + +       L
Sbjct: 177 HLHEAQKHTLLFTDSSDSQPKLA--KPVPYNAL-AGGEINLPYVVDLQFKTTAQVSHTEL 233

Query: 227 DDYDFRKPNAWLFQAQQNP--ASPKPGSIDVYDWPGRFVDKGHGEFYARIRQERWQVEHQ 284
            DY F+KP     Q  Q    A  +P + + +D PGR+ D  +G+ +++IR E  + +  
Sbjct: 234 KDYSFKKPAYGFTQRTQGKDIAYQQP-NYEHFDAPGRYKDDANGKAFSQIRLEYLRRDAL 292

Query: 285 QIQATATAAGIAPGHTFTLTNAPFFSDNGEYLVTAAGYHFEENRYAS---GEGETIHRTD 341
              A +    +  G  F L +    + N ++LV  A +   + +      G G T +   
Sbjct: 293 LADAKSDEPLLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQ 352

Query: 342 FTVIPSAVVYRPAQTTAWPRTYGPQTAKVVGPNGESIWTDKYGRVKVKFHWDRLAKGDDT 401
             +IP+ + +R A+  A P+  GP  A VVGP GE I+ D +GRVKV F WDR +  ++ 
Sbjct: 353 LKLIPAHITWR-ARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEK 411

Query: 402 SSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFINGDPDRPIITGRVYNDASMPPWALPAA 461
           SSCWVRV+  WAG  YG + IPRVG EV+V F+NGDPD+PIITGR Y+  +  P+ALP  
Sbjct: 412 SSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDH 471

Query: 462 ATQMGFMSRSKGGSVDNANALRFEDKAGAEQVWIQAERNMDTSVKNDETHSVGGARSHYV 521
            T+    + +  G     N L FED+AG+EQ+ + A+++ D  +++D T  +   +   V
Sbjct: 472 KTKTVLRTETHQG--QGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTV 529

Query: 522 KKNELHRVEANQTQAVKGGTE---ILTGKGKLDASVEQYV-----IASGTKLRLVSGESA 573
             +   R++ NQ   V+G       L    ++ AS++  V     + +G ++ L SG + 
Sbjct: 530 DNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSG-AK 588

Query: 574 IELNANGKINLIGKEFNFFVEGDGYITTGGKLHLNTSGTKPGTTAPGSGHKGDIDAA 630
           I + A  ++ L        V+  G    G  ++LN      G+   GS + G + AA
Sbjct: 589 IVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAG----GSAGSGSAYGGQLAAA 641