Pairwise Alignments

Query, 846 a.a., Rhs element Vgr protein from Enterobacter asburiae PDN3

Subject, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  282 bits (721), Expect = 9e-80
 Identities = 200/624 (32%), Positives = 307/624 (49%), Gaps = 56/624 (8%)

Query: 83  GTRYAVYQLTVEPDLWPMKRDRNLRIFQGQTVPQIVKTLLGEHQVN---VEDKLTGSYRV 139
           G  +  YQLT+ P L  +    N RIFQ QTVP+I+  LL E  +N      K  G  R 
Sbjct: 92  GHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQEMGINDYAFALKRDGVQR- 150

Query: 140 WDYCVQYQESSLDFISRLMELEGIAYHFSHEADKHTLVLTDAATQHQPFSGYEVIPYHQT 199
            ++CVQY+ES +DF+ RL   EG+ Y F HEA KHTL  +DA+         E IPY+  
Sbjct: 151 -EFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDASDSLSKLP--EPIPYNAL 207

Query: 200 PSGGSTDEEGISQWALEDSVTPGIYSLDDYDFRKPN-AWLFQAQQNPASPKPGSIDVYDW 258
             GG+ D   I               L DY F+KP  ++L   Q      +      +D 
Sbjct: 208 V-GGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQGTELDYQQTRYQHFDA 266

Query: 259 PGRFVDKGHGEFYARIRQERWQVEHQQIQATATAAGIAPGHTFTLTNAPFFSDNGEYLVT 318
           PGR+ D  +G  +++IR +  +         +    +  G+ F L      + N +++V 
Sbjct: 267 PGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFDLQEHLDPAMNRDWVVV 326

Query: 319 AAGYHFEENRYAS---GEGETIHRTDFTVIPSAVVYRPAQTTAWPRTYGPQTAKVVGPNG 375
           +  +  E+ +      G G T +   F++IP  + +R A+    P+  GP  A VVGP G
Sbjct: 327 SINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWR-AEPQPKPQVDGPMIATVVGPEG 385

Query: 376 ESIWTDKYGRVKVKFHWDRLAKGDDTSSCWVRVSSAWAGQGYGGVQIPRVGDEVVVDFIN 435
           E I+ D++GRVK+ F WDR + G++ SSCWVRVS  WAG  YG + IPR+G EV+V+F+N
Sbjct: 386 EEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGFIAIPRIGHEVIVEFLN 445

Query: 436 GDPDRPIITGRVYNDASMPPWALPAAATQMGFMSRSKGGSVDNANALRFEDKAGAEQVWI 495
           GDPD+PIITGR Y+  + PP+ LP   T+    + +  G  +  N L FED+AG EQ+++
Sbjct: 446 GDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG--EGFNELSFEDQAGKEQIYL 503

Query: 496 QAERNMDTSVKNDETHSVGGARSHYVKKNELHRVEANQTQAVK-------GGTEILTGKG 548
            A+++ D  ++ND T  +       V+ ++  +++ NQ   V+        G ++L+ +G
Sbjct: 504 HAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVEWESREAVTGEQVLSIEG 563

Query: 549 KLDASV-EQYVIASGTKLRLVSGESAIELNANGKINLIGKEFNFFVEGD--GYITTGGKL 605
            L     + +V  +GT++ + +G+  + + A  +I +  K    FV+ D  G   +G  +
Sbjct: 564 SLHVKTGKVWVNEAGTEIHVKAGQKVV-IEAGSEITV--KAGGSFVKVDPAGVHLSGALV 620

Query: 606 HLNTSGTKPGTTAPGSGHKGDIDA------------------------AVQAKFTPGKEN 641
           +LN+     G+   GSG  G + A                        A QA     K  
Sbjct: 621 NLNSG----GSAGSGSGFGGAMPALPGGLEPAVALAPPQTISYQALLQAEQANVPAVKVC 676

Query: 642 KAGAAASAPAEASKTATPPASNAP 665
              A  + PA  S T  PP   AP
Sbjct: 677 PLAAQEATPAVNSITPPPPPPIAP 700