Pairwise Alignments

Query, 871 a.a., type VI secretion ATPase, ClpV1 family from Enterobacter asburiae PDN3

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  508 bits (1308), Expect = e-148
 Identities = 317/858 (36%), Positives = 470/858 (54%), Gaps = 70/858 (8%)

Query: 20  SLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVIHHFALDEQQLTRDIVAALDVLP 79
           ++  A +    R + Y+E VH +  L+ Q    ++ ++    +D  QL   +   LD LP
Sbjct: 13  AISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKLGEMLDRLP 72

Query: 80  R------------GASSVSDLSEHIDSAVERAWVFGSLKFGVSRIRGGHLLIGMLKTWNL 127
           +               S+ +L + +    + A++   + + ++ I     L  +LK + L
Sbjct: 73  KVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEI-YLLAAIEDKGPLGHLLKEFGL 131

Query: 128 ANVLKSISSQFTRLNVEVLIEQFDAICANSKETQQAAAAADAPAGAVPAAQGTLAQYGQD 187
               K +S    ++     +        N++E +QA                 L ++  D
Sbjct: 132 TE--KKVSEAIEKIRGGQKVND-----PNAEELRQA-----------------LEKFTID 167

Query: 188 LTARARDGKIDPVVGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLALRIADGD 247
           LT RA  GK+DPV+GRD+EIR+ + +L RR +NNP++ GE GVGKTA+VEGLA RI + +
Sbjct: 168 LTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNE 227

Query: 248 VPEPLQNIQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSATPIILFIDEIHTLIGAG 307
           VPE L+  ++  LD+G L AGA  +GEFE RL++++NE+      IILFIDE+HT++GAG
Sbjct: 228 VPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAG 287

Query: 308 GQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVHEPDEAKAI 367
             +G+ DA N+LKPALARG+L  +GATT  EY++YIEKDPAL RRFQ V V EP     I
Sbjct: 288 KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTI 347

Query: 368 LMLRSTVSPLETHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACARVAVSQSA 427
            +LR      E HH V + D A+ AA  LSHRYI  RQLPDKA+ L+D A + + +   +
Sbjct: 348 AILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDS 407

Query: 428 PPAQLEDCLRHLAALDVEIEIAEREARVGAGEAERVTALRAERDAYETKREALSRRWEEE 487
            P  L+   R +  L +E +    E        +R+  L  E    E     L   W+ E
Sbjct: 408 KPEALDKLERKIIQLKIEQQALSNEH--DEASEKRLAILNEELQEKERDYAELEEVWKAE 465

Query: 488 RSLVQEIIRLRAALFAAG-DEDTAELRGQLAEQQQ---------------ALNALQGDEP 531
           ++ +     ++AAL  A  D + A   G L    +               A  A   +  
Sbjct: 466 KAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMT 525

Query: 532 LLFAAVDENVVAAVVSDWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLDLIARRVK 591
           LL   V +  +A V+S  TGIP+ +M++ E + +L + D L++RVIGQ+  ++++A  ++
Sbjct: 526 LLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIR 585

Query: 592 TSRAKLDDPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSEFQEAHTVST 651
            SRA L DPN+P+G F+  GP+GVGKTE    LA  L+  E  ++ ++MSEF E H+V+ 
Sbjct: 586 RSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVAR 645

Query: 652 LKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHEIFFQVFDKGWMEDGEGR 711
           L GAPPGYVGY EGG LTEAVRR+PYSV+LLDE+EKAHPDV  I  QV D G + DG+GR
Sbjct: 646 LVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGR 705

Query: 712 HIDFRNTIIILTSNVGTDLISAMCADPELMPEPDALSGALRQPLLEV----FPPALLGRL 767
            +DFRNT++I+TSN+G+  I    A  +           +++ +++V    F P  L R+
Sbjct: 706 TVDFRNTVVIMTSNLGSSRIQENFARLDYQ--------GIKEQVMDVVSKHFRPEFLNRV 757

Query: 768 -LVVPYYPLSDEMLGQIVRLQLKRIQRRLEENHSIISEFDDSVVEQIVQRCTEVESGGR- 825
              V ++PL  E +  I  +QL R+++RL E    + E DD  ++ I     +   G R 
Sbjct: 758 DESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL-EVDDEALDLIAHVGFDPVYGARP 816

Query: 826 MVDAILTNTLLPQMSQIL 843
           +  AI  N   P    IL
Sbjct: 817 LKRAIQQNVENPLAKSIL 834