Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 39/209 (18%)

Query: 4   VIDTETCDL--QGG-------IVEVASVDVVDGKIVNPMSHL-VRPDRPISPQAMAIHRI 53
           V+DTET  +  +GG       I+E+ +V++++ K+     H+ ++PDR I  +A+ +H I
Sbjct: 14  VLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVHGI 73

Query: 54  TESMVADKPWI----EEIIPHYYGSPWYVAHNASFDRRVL----PEMPG---------EW 96
           T+  + DKP      EE +    G+   VAHNA FD   +     ++ G         + 
Sbjct: 74  TDEFLKDKPEYKDVHEEFVDFIKGAE-LVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCKV 132

Query: 97  ICTMKLARRLWPGIKYSNMALYKSRKLSVRTPEGL-HHHRALYDCYITAALLIDI--MNI 153
             T+ +A+R++PG K +N+ +   R        G+ + HR L+   + A +L D+  +  
Sbjct: 133 TDTLAMAKRIFPG-KRNNLDILCER-------YGIDNSHRTLHGALLDAEILADVYLLMT 184

Query: 154 SGWTPDDMATITGRPALLTTFTFGKYRGK 182
            G T    +++T     L+  +  + R +
Sbjct: 185 GGQTSLQFSSVTQNSGELSAESLKRARSE 213