Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 230 a.a., DNA polymerase III, epsilon subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 63.9 bits (154), Expect = 2e-15
 Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 21/166 (12%)

Query: 4   VIDTETCDLQGG----IVEVASVDVVDGKIVNPMSHL-VRPDRPISPQAMAIHRITESMV 58
           V+DTET  L       +VE+  +++++        HL V P+R + P+A  +H ++E+ +
Sbjct: 5   VLDTETTGLDPATGDRLVEIGCIELINHMPSGNDLHLYVNPERDMPPEAFRVHGLSEAFL 64

Query: 59  ADKPWIEEIIPH---YYGSPWYVAHNASFDRRVL---------PEMP-GEWICTMKLARR 105
           ADKP   E++     + G    + HNA+FD + L         P +P    + T+++A+ 
Sbjct: 65  ADKPLFAEVVDEFLAFIGEDRLIIHNAAFDMKFLNAELARLKRPPLPMSRALDTLRMAQA 124

Query: 106 LWPGIKYSNMALYKSRKLSVRTPEGLHHHRALYDCYITAALLIDIM 151
            +PG + S  AL   R+  V T      H AL DC + A + ++++
Sbjct: 125 RFPGAQASLDAL--CRRFGVDT-SSRTKHGALIDCVLLAEVYLELI 167