Pairwise Alignments

Query, 220 a.a., DNA polymerase III, epsilon subunit and related 3'-5' exonucleases from Enterobacter asburiae PDN3

Subject, 204 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 48.9 bits (115), Expect = 7e-11
 Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 18/158 (11%)

Query: 4   VIDTETCDL---QGG-IVEVASVDVVDGKIVNPMSHLVRPDRPISPQAMAIHRITESMVA 59
           V+D ET  L   QG   +E+ +V +  G +V+    L+ P   +S        IT +M++
Sbjct: 8   VLDFETTGLSPLQGDRAIEIGAVKLQQGVVVDRFQQLMNPGFAVSSFIADYTGITNAMLS 67

Query: 60  DKPWIEEIIPHYYG---SPWYVAHNASFDRRVLP--------EMPGEWICTMKLARRLWP 108
           D P  E ++  +         VAHNASFD++ L         E    + C++ LARRL+ 
Sbjct: 68  DAPSCETVMADFADFIQGCHLVAHNASFDQKFLTAEFARIDLEQSQPFACSLLLARRLFQ 127

Query: 109 GIKYSNMALYKSRKLSVRTPEGLHHHRALYDCYITAAL 146
            +    +    +  L +   +G+  HRAL D  +T AL
Sbjct: 128 AVPNHQLGTLVN-YLGIAN-DGV-FHRALNDAEVTGAL 162