Pairwise Alignments

Query, 336 a.a., Holliday junction DNA helicase subunit RuvB from Enterobacter asburiae PDN3

Subject, 350 a.a., Holliday junction DNA helicase RuvB (NCBI) from Rhodospirillum rubrum S1H

 Score =  425 bits (1093), Expect = e-124
 Identities = 208/332 (62%), Positives = 262/332 (78%), Gaps = 2/332 (0%)

Query: 3   EADRLVSAGTIQADDVVDRAIRPKLLDEYIGQPQVRSQMEIFIQAAKLRGDALDHLLIFG 62
           E +RL+S    + +  VD A+RP+ L +++GQ Q R  + +F+QAA+ RG+A+DH+L  G
Sbjct: 7   EDERLISGRRREGE--VDAALRPQSLADFVGQRQTRENLGVFVQAARARGEAMDHVLFHG 64

Query: 63  PPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVV 122
           PPGLGKTTLA IVA E+GV  R TSGP++ KAGDLAA+LTNLEP DVLFIDEIHRL+P +
Sbjct: 65  PPGLGKTTLAQIVARELGVGFRGTSGPMIVKAGDLAAILTNLEPRDVLFIDEIHRLNPAI 124

Query: 123 EEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLE 182
           EEVLYPAMED+QLD++IGEGPAARS++IDLPPFTL+GATTR+G LT+PLRDRFGI  RL+
Sbjct: 125 EEVLYPAMEDFQLDLIIGEGPAARSVRIDLPPFTLVGATTRSGLLTTPLRDRFGIPLRLD 184

Query: 183 FYQVADLQHIVGRSARYMGLEMSEEGAFEVAKRSRGTPRIANRLLRRVRDFAEVKHDGTI 242
           FY+  +L  IV R +R +G+ +++EGA EVA+RSRGTPR+A RLLRRVRDFA V     +
Sbjct: 185 FYETDELVQIVTRGSRLLGMALTDEGAREVARRSRGTPRVAGRLLRRVRDFAAVAGRSPV 244

Query: 243 SVEIAAQALDMLNVDAEGFDYMDRKLLLAVLDKFFGGPVGLDNLAAAIGEERETIEDVLE 302
              IA  AL+ L VD  G D MDR+ L  + D + GGPVG+D LAAA+ EER+T+EDV+E
Sbjct: 245 DAFIADAALNRLEVDGRGLDAMDRRYLSRMADHYGGGPVGVDTLAAALAEERDTVEDVIE 304

Query: 303 PYLIQQGFLQRTPRGRMATVRAWNHFGITPPA 334
           PYLIQQGF++RTPRGRM T  AW H G+TPPA
Sbjct: 305 PYLIQQGFIKRTPRGRMLTAIAWTHLGLTPPA 336