Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 323 a.a., ribose ABC transporter permease from Pantoea sp. MT58

 Score =  202 bits (513), Expect = 1e-56
 Identities = 116/324 (35%), Positives = 175/324 (54%), Gaps = 5/324 (1%)

Query: 4   VTTSGAPKSKSALSFGRIWDQYGMLVVFAALFLACAIFVPNFATFINMKGLGLAISMSGM 63
           +TT   P S+   S   + +Q   L+    L    A   PNF T  N+  +    S++ +
Sbjct: 1   MTTQTLPASRRWFSKSWLLEQKS-LIALMVLIAVVASQSPNFFTVANLFNILQQTSVNAI 59

Query: 64  VACGMLFCLASGDFDLSVASVIACAGVTTAVVINMTESLWIGVLAGLLLGVISGLVNGFV 123
           +A GM   + +   DLSV S++A  G   A ++ M  +  + V A L LG   G + G +
Sbjct: 60  MAVGMTLVILTSGIDLSVGSLLALTGAVGASLVGMEVNALVAVAASLALGAAIGGLTGTI 119

Query: 124 IARLKINALITTLATMQIVRGLAYIISDGKAVGI----EDERFFTLGYANWLGLPAPIWL 179
           +AR K+ A I TL  M ++RG+  + +DG  +        +     G    LG+PAP+WL
Sbjct: 120 VARGKVQAFIATLVMMLLLRGVTMVYTDGSPINTGFSANADLLGWFGIGRPLGIPAPVWL 179

Query: 180 TVACLILFGFLLNRTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIIL 239
                I   ++L  T  GR   A+GGNE A RL+G+ V R KII++ LSG+++A AG I 
Sbjct: 180 MALVFIAAWYMLQHTRLGRYIYALGGNEAATRLSGINVNRVKIIVYSLSGMLAALAGTIE 239

Query: 240 ASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNIS 299
            +R++S QP    GYEL  I+A VLGG SL GG G+I   + G LILG + N +NL+ +S
Sbjct: 240 VARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIFGTLIGALILGFLNNGLNLMGVS 299

Query: 300 PFSQYVVRGLILLAAVIFDRYKQK 323
            + Q +V+ +++L AV+ D    K
Sbjct: 300 SYYQMIVKAVVILLAVLVDNKSSK 323