Pairwise Alignments

Query, 328 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

Subject, 329 a.a., ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  199 bits (507), Expect = 6e-56
 Identities = 114/310 (36%), Positives = 178/310 (57%), Gaps = 13/310 (4%)

Query: 20  RIWDQYGMLVVFAALFLACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDL 79
           R   + G L+    L +  +I  P F T  N+  +G+  +   ++A G  F +     DL
Sbjct: 23  RFASRNGALIGLIILCIILSIATPAFLTGPNLLNVGIQAATVAILAFGQTFVIVEAGIDL 82

Query: 80  SVASVIACAGVTTAVV-INMTESLWIGVLAGLLLGVISGLVNGFVIARLKINALITTLAT 138
           SV SV A + +  A    +M     + ++ GL+ G + G ++G   A LK+ + I TLA 
Sbjct: 83  SVGSVAAVSSMLVAYTGASMGLPPILTIVVGLVTGAVFGALSGIANAFLKLPSFIATLAM 142

Query: 139 MQIVRGLAYIISDGKAVGIEDERFFTLGYANW-----LGLPAPIWLTVACLILFGFLLNR 193
           M + RGL  +ISDG+ V        T G  N+     LG+P PI + +   ++   +LN 
Sbjct: 143 MSVARGLTLVISDGRPVS-------TSGMVNFFGSTVLGIPIPIVMMIIMGVIASVILNF 195

Query: 194 TTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAAAGIILASRMTSGQPMTSIG 253
           T+ GR+  A+GGN EA+RL+G+ V +T+I++FVLSG+ +A AG+++A R+ S QP  + G
Sbjct: 196 TSIGRSMYAVGGNMEASRLSGISVHKTQIMVFVLSGIFAAVAGLVIAGRLHSAQPQAASG 255

Query: 254 YELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFSQYVVRGLILLA 313
           YE+  I++ V+GG SL GG GKIS    G ++L  + N +N+LN+S F Q VV GL++  
Sbjct: 256 YEMDAIASVVIGGASLSGGKGKISGTFIGAILLAVIRNGLNILNVSSFWQQVVIGLVIAF 315

Query: 314 AVIFDRYKQK 323
           AV FD  ++K
Sbjct: 316 AVSFDTLRRK 325