Pairwise Alignments

Query, 274 a.a., Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region from Enterobacter asburiae PDN3

Subject, 480 a.a., flagellin from Rhodanobacter denitrificans MT42

 Score =  192 bits (487), Expect = 2e-53
 Identities = 104/183 (56%), Positives = 131/183 (71%), Gaps = 6/183 (3%)

Query: 4   INTNLMSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQIKGMTQA 63
           +NTN+ SL  Q NL KSQS L TAIERLSSG+RINSAKDDAAG AI+ R T+QI G+ QA
Sbjct: 5   VNTNISSLNAQQNLAKSQSKLATAIERLSSGMRINSAKDDAAGLAISTRFTTQINGLNQA 64

Query: 64  ARNANDGISMAQTAEGSLNEINNNLQRVRELAVQASNGTNSTSDLASLQDEVTARLAEIN 123
             NANDGIS+AQT E +LNE+ NN+QR+R LAVQ++N TNS SD A+L  EV  RL+EI 
Sbjct: 65  VSNANDGISLAQTTESALNEVTNNMQRIRTLAVQSANATNSDSDRAALDAEVQQRLSEIT 124

Query: 124 RVAGKTDFNGIKLLDGTAGTAGKVKIQVGVNDGDTIDLDLS---GAKADTTTLGVNAIDL 180
           R++ +T FNG  +LDG+ G+A     Q+G N G+TI ++LS   GAK         ++DL
Sbjct: 125 RISQQTTFNGRHVLDGSFGSAA---FQIGANVGETISVNLSQGAGAKQVGQMANTQSVDL 181

Query: 181 KAM 183
            AM
Sbjct: 182 GAM 184



 Score =  103 bits (257), Expect = 7e-27
 Identities = 83/242 (34%), Positives = 121/242 (50%), Gaps = 14/242 (5%)

Query: 36  RINSAKDDAAGQAIANRMTSQIKGMTQAARNANDGISMAQTAEGSLNEINNNLQRVRELA 95
           +I  +   AA  AIA    +     T  A        +   A G L      +Q     A
Sbjct: 250 KITISNTTAAAVAIAGTKQATYFSTTSVAAQTPASTGILTLATGDLT-----IQSASGGA 304

Query: 96  VQASNGTNSTSDLASLQDEVTAR-LAEINRVAGKTDFNGIKLLDGTAGTAGKVKIQVGVN 154
               NGT +++   +L D + A+ +A ++     T  + + L   +A T    K   G  
Sbjct: 305 AVDMNGTYNSAQ--NLVDAINAKGVAGVSAYYDSTS-HMVHLNSQSALTVNGTKSGAGAG 361

Query: 155 DGDTIDLDLSGAKADTTTLGVNAIDLKAMTATD--LDTIDKAIAKVDTARSGLGAVQNRF 212
           +   +    +GA A  T   ++  D+K +   +  +  ID A++ V + RS LGAVQNRF
Sbjct: 362 N---LGFTGAGATAIATGGSLSGSDVKTVAGANDTISRIDAALSTVSSMRSDLGAVQNRF 418

Query: 213 TSAINNLNNTSNNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSL 272
            S I NL   S NLS+++S+IQDAD+A E +NMS A ILQQAG SVL+QAN   Q+VL L
Sbjct: 419 QSTIANLQTISQNLSSSRSQIQDADFAAETANMSSANILQQAGVSVLAQANASTQSVLKL 478

Query: 273 LR 274
           L+
Sbjct: 479 LQ 480