Pairwise Alignments

Query, 274 a.a., Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region from Enterobacter asburiae PDN3

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  189 bits (479), Expect = 8e-53
 Identities = 114/292 (39%), Positives = 162/292 (55%), Gaps = 21/292 (7%)

Query: 3   VINTNLMSLTTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRMTSQIKGMTQ 62
           VIN N+M++    NL+ S   L T++ RLSSGLR+ +A DDAAG AI   M S I  + Q
Sbjct: 4   VINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISALNQ 63

Query: 63  AARNANDGISMAQTAEGSLNEINNNLQRVRELAVQASNGTNSTSDLASLQDEVTARLAEI 122
             RNAND IS+ QTA+G+L  I+  L R++ELA QA+ GT ++     +  E  A  +EI
Sbjct: 64  GVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMASEI 123

Query: 123 NRVAGKTDFNGIKLLDGTAG----------TAGKVKIQVG-VNDG--DTIDLDLSGAKAD 169
            R+A  TDFNG+ LL+G             + GK+KI  G  ND   D   + +  + A 
Sbjct: 124 TRIANATDFNGLHLLNGNLSSDTHDGSGLQSTGKMKIHFGTANDSAEDYYYVQIGTSTAS 183

Query: 170 TTTLGVNA--------IDLKAMTATDLDTIDKAIAKVDTARSGLGAVQNRFTSAINNLNN 221
              +G  A        I  ++     L  I  AI   D  R+ LGA+QNR  + I+NL  
Sbjct: 184 ALGVGNQATAGSAGYTISTQSAAQQALVAIQNAIISKDNIRASLGALQNRLENTISNLRT 243

Query: 222 TSNNLSAAQSRIQDADYATEVSNMSRAQILQQAGTSVLSQANQVPQTVLSLL 273
            + NL +A+SRI D D ++E++   R QIL Q+  ++LSQAN +P+  + LL
Sbjct: 244 QAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVAMLSQANSLPRMAMQLL 295