Pairwise Alignments

Query, 388 a.a., D-alanyl-D-alanine carboxypeptidase from Enterobacter asburiae PDN3

Subject, 395 a.a., penicillin-binding protein 6, Serine peptidase, MEROPS family S11 from Pseudomonas syringae pv. syringae B728a

 Score =  277 bits (708), Expect = 4e-79
 Identities = 156/381 (40%), Positives = 231/381 (60%), Gaps = 14/381 (3%)

Query: 3   RRLFIAVSLLASSVSSAFAAEPLDFSPQPPAIQAGSWVLMDYTTGQILTAGNEHQQRNPA 62
           +RL + V L+ +   + +AAE +  +P  P + A S+VLMD T+G +L   N  Q+  PA
Sbjct: 17  KRLCLLVPLIITP--TVWAAEQM--TPAAPQLAAKSYVLMDATSGNVLVENNGDQRLAPA 72

Query: 63  SLTKLMTGYVVDRAIDSHRITPDDIVTVGRDAWAKGNPVFDGSSLMFLKEGDRVSVRDLS 122
           SLTKLMT Y+    I   +I  +D VT+  +AW  G       S MF+K G +V+V DL 
Sbjct: 73  SLTKLMTAYIATLEIRRGQIGENDPVTISENAWRTGG------SRMFIKVGSQVTVSDLL 126

Query: 123 RGLIVDSGNDACVALADHVAGGQPQFVKMMNDYVQKLNLRDTHFETVHGLDAPGQHSSAY 182
            G+I+ SGNDA VA+++H+AG +  F  MMN     L + ++HF    GL  P  +SSA+
Sbjct: 127 HGIIIQSGNDASVAISEHIAGSEDAFADMMNKTAGDLGMTNSHFMNPTGLPNPEHYSSAH 186

Query: 183 DLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLW-DKTMNVDGLKTGHTSGAGF 241
           D+A+L+RAIIH +P  Y +YS+K   WNGI Q NRN LLW DKT  VDGLKTGHT  AG+
Sbjct: 187 DMAILARAIIHEDPAHYAIYSQKEFFWNGIKQPNRNLLLWRDKT--VDGLKTGHTDEAGY 244

Query: 242 NLIASAVDGQRRLIAVVMGADSPKGREDQARKLLHWGQQNFDTVQILHSGKKVGTERIWY 301
            +++SAV    RLIAVV G +S + R  + +KLL +G + F+T      G ++    +W 
Sbjct: 245 CMVSSAVRDGMRLIAVVFGTNSEQARAAETQKLLTYGFRFFETQNFYQKGTELAQATVWK 304

Query: 302 GDKEQVKLGTDQDFWLALPKAEVPNIKAKYVLDKKELEAPIAAHQRVGEIQLYDRDKVVA 361
           G + QVK G  +D  + +PK ++  + A   ++  +L APIA    +G++++   D+VV 
Sbjct: 305 GTERQVKAGLAEDLSMTMPKGDMKKLSASMTMN-PQLVAPIAKGDVIGKVEVKKDDQVVH 363

Query: 362 HWPLVTLEAVDKGGLFSRMSD 382
              L+ L+ V++GG+F R+ D
Sbjct: 364 TANLIALDGVEEGGIFRRVWD 384