Pairwise Alignments

Query, 332 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

Subject, 317 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 18/298 (6%)

Query: 6   LTLSAVMASMLFG--AAAHAADTRIGVTIYKYDDNFMSVVRKAIEKDAKAAPDVQLLMND 63
           L  SAV+A+ L    + A AA  +I +        +   + +   ++AK   +V+LL+ D
Sbjct: 8   LLCSAVLAAGLTFQLSPAFAAGEKILINFQTLSIPYFIYMHEQASQEAKVL-NVELLVQD 66

Query: 64  SQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPIVFFNKEPSRKALD 123
           +Q+  +KQ+  ++  L +GV A+ +   D  A    + +   + VP+V  +    R+   
Sbjct: 67  AQSSSTKQSSDVENALTQGVDAMVVAPNDVTALAPALNEVLSEKVPLVTVD----RRVEG 122

Query: 124 SYDKAYYVGTDSKESGIIQGDLIAKHWAANPNWDLNKDGQIQFVLLKGEPGHPDAEARTT 183
           +     YV  DS   G +  +L+  +        +    ++ F+   G PG   A  R  
Sbjct: 123 TDTPVPYVTADSVAGGRLMAELVTSN--------MKNGARVAFI--GGTPGSSTAIDRAK 172

Query: 184 YVIKELNDKGLKTQQLALDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVE 243
            V + L   G K Q +A  +  W+ A+A    +  L+  +AN  + +I  +  MA+GA E
Sbjct: 173 GVHEGLKAGGGKFQLVAEQSGEWERAKAMSVAENILTSLSANPPDAIICASGDMALGAAE 232

Query: 244 ALKAHN-KSSIPVFGVDALPEALALVKSGAMAGTVLNDANNQAKATFDLAKNLADGKG 300
           A++A   K  + V G DA PE L  ++ G +AG V    + Q +    +A     G+G
Sbjct: 233 AVRATGLKGKVKVIGFDAYPEVLRAIRDGDIAGIVEQSPSKQIRTALRMAVKKVRGEG 290