Pairwise Alignments

Query, 186 a.a., recombinase family protein from Escherichia coli Nissle 1917

Subject, 196 a.a., Rac prophage; predicted site-specific recombinase (NCBI) from Escherichia coli BW25113

 Score =  154 bits (388), Expect = 1e-42
 Identities = 78/180 (43%), Positives = 119/180 (66%), Gaps = 2/180 (1%)

Query: 4   FGYGRVSTSQQDTENQRLELGQAGWQI--DYWFADVVSGKVPAMQRKAFSEMLNKIRDGE 61
           F Y R+ST  Q TENQR E+  AG++I       + +SG     +R  F+ +L +++ G+
Sbjct: 5   FAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGD 64

Query: 62  TLVVAKLDRLGRDAIDVLQTVRALADRNIKVLVHQLGNTDLTSAAGKLLLSMLAAVAEME 121
            L+V KLDRLG +A+D+ +TV  L +  I+V    LG  DLTS  GK+++ +++AVAE E
Sbjct: 65  QLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFE 124

Query: 122 RDLLIERTQAGLSRAKAEGKKLGRPPKIASEARREILEKKNSGLSISALARQYGVSRATV 181
           RDLL+ERT +G+ RA+  GK+ GRPP +  E ++ + E+  SG+SISA+AR++  SR T+
Sbjct: 125 RDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQVVFERIKSGVSISAIAREFKTSRQTI 184