Pairwise Alignments

Query, 457 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase from Escherichia coli Nissle 1917

Subject, 471 a.a., UDP-N-acetylmuramate-alanine ligase from Agrobacterium fabrum C58

 Score =  184 bits (468), Expect = 4e-51
 Identities = 137/468 (29%), Positives = 213/468 (45%), Gaps = 61/468 (13%)

Query: 3   IHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEKQGIELIQGYDASQLDPQP 62
           +H +GI G  M G+A +   LGH V GSD      +  L +K GIE+  G+ A  L    
Sbjct: 10  VHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDK-GIEVFVGHTADNLG-DA 67

Query: 63  DLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRDRWVLAVAGTHGKTTTAGMAT 122
           ++V++  A+ + NP + A  EK++P +   + L + ++R R  +A+ GTHGKTTT  M  
Sbjct: 68  EVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAE-LMRFRNAIAIGGTHGKTTTTSMVA 126

Query: 123 WILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEADEYDCAFFDKRSKFVHYCPRTLI 182
            +LE     P  + GG+   +  +AR+GE ++ V+EADE D         F+       +
Sbjct: 127 TLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESD-------GTFLKLPADVAV 179

Query: 183 LNNLEFDHADIFDDLKAIQKQFHHLVRIVPVQGRIIWPENDINLKQTMAMGCWSEQELVG 242
           + N++ +H D + +  A++  F   V  VP  G                + C    E+  
Sbjct: 180 ITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYG--------------FGVMCLDHPEVQA 225

Query: 243 EQGHWQAKKLTT-------DASEWEVLLDGEK-----------------VGEVKWSLVGE 278
             G  + +K+ T       D     V +DG +                   ++   + G 
Sbjct: 226 LVGRIEDRKVITYGENPQADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGR 285

Query: 279 HNMHNGLMAIAAARHVGVAPADAANALGSFINARRRLELRGEANGVTVYDDFAHHPTAIL 338
           HN+ N   AIA A  +G++ AD    L SF   +RR  L GEANGV V+DD+ HHP  I 
Sbjct: 286 HNVSNATAAIAVANRLGISEADIKKGLASFAGVKRRFTLTGEANGVQVFDDYGHHPVEIK 345

Query: 339 ATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFL----------LQ 388
           A LAA R    G  RIIAV +P   + ++    DD A     AD + L          ++
Sbjct: 346 AVLAAAREACKG--RIIAVHQPHRYS-RLSSLFDDFAHCFNDADTILLAPVYAAGEDPIE 402

Query: 389 PAHIPWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNG 436
            A     V+ +  A  + A +    + LA  V   A PGD ++++  G
Sbjct: 403 GASSEALVSAIKAAGHRDARFLEKREDLASQVAAIANPGDFVVLLGAG 450