Pairwise Alignments

Query, 274 a.a., acid resistance transcriptional activator GadX from Escherichia coli Nissle 1917

Subject, 253 a.a., predicted DNA-binding transcriptional acfivator (NCBI) from Escherichia coli BW25113

 Score = 99.4 bits (246), Expect = 7e-26
 Identities = 70/239 (29%), Positives = 126/239 (52%), Gaps = 26/239 (10%)

Query: 8   CLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIQVDKCVENFVLV--SRDTLSLFLPM 65
           C + +  H +   +++ +Y + +G  L+  +A +   +    +F  +  + +T+  +L  
Sbjct: 5   CSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPYERHFKEIGFTENTIKKYLQC 64

Query: 66  LKEEALKLHVHKK------VPSLLVHHCTRDIPVFQEVAQLS--QNKNLRYAEMLRKRAL 117
              + + + V  K      VP+ L++         + +A L+  +  +  ++E+L     
Sbjct: 65  TNIQTVTVPVPAKFLRASNVPTGLLN---------EMIAYLNSEERNHHNFSELL----- 110

Query: 118 IFALLSVFLEDTQFIPLLLNVLQPNMRTRVCTVINNNIAHEWTLARIASELLMSPSLLKK 177
           +F+ LS+F     FI LL N +  ++  +V  ++N   AH W L  I   L +S SLLKK
Sbjct: 111 LFSCLSIFAACKGFITLLTNGVL-SVSGKVRNIVNMKPAHPWKLKDICDCLYISESLLKK 169

Query: 178 KLREEGTSYSQLLTECRMQRALQLIVIYGVSIKRVAVSCGYHSVSYFIYVFRNYYGMTP 236
           KL++E T++SQ+L + RMQ A  LI + G S+ ++A  CGY S SYFIY FR ++G +P
Sbjct: 170 KLKQEQTTFSQILLDARMQHAKNLIRVEG-SVNKIAEQCGYASTSYFIYAFRKHFGNSP 227