Pairwise Alignments

Query, 327 a.a., TRAP transporter substrate-binding protein from Escherichia coli Nissle 1917

Subject, 327 a.a., TRAP transporter substrate-binding protein from Bosea sp. OAE506

 Score =  212 bits (539), Expect = 1e-59
 Identities = 112/302 (37%), Positives = 183/302 (60%), Gaps = 5/302 (1%)

Query: 13  LLTSCLLISNTTL---AKTTLKLSHNQDKSHAVHKALSYLADKTKEYSNGELVIRIYPNA 69
           LL    ++++  L   A+TTL+ +      +   +A+ +++   +E + G + I ++ +A
Sbjct: 10  LLAGAAMLASVALPAAAQTTLRSTDIHPTDYPTVEAVRHISKLLEERTKGRIKINVFHSA 69

Query: 70  TLGNERESLELMNSGALQMVKVNAASLESFAPDYSLFSLPFLFRDRDHYYRVLQSDLGKK 129
            LGNE++++E    G + + ++N A   +  P  ++ SLPF+FR   H   V+   +G  
Sbjct: 70  QLGNEKDTIEQTRFGVIDLNRINMAPFNNLIPATNVPSLPFIFRSVAHMRTVMDGPIGDS 129

Query: 130 ILNSSESKGFVGITYYDGGARSFYSNK-PITKPEDLAGMKIRVQQSPSAIAMMKALGGVA 188
           IL   E    VG+ +YD G+RSFY++K PI  P D+ GMKIRVQQS   +A++ ALG  A
Sbjct: 130 ILKEFEKHDLVGLAFYDSGSRSFYNSKRPINTPADMKGMKIRVQQSDMFVALVSALGANA 189

Query: 189 TPMAQGELYTALQQGVVDGGENNTVVYADMRHAEVAKVYSRDEHTMVPDVLIISTDVLNK 248
           TPMA GE+Y+ALQ GV+DG ENN   +   +H EV+K YS  EH++ P+VL++S    +K
Sbjct: 190 TPMAFGEVYSALQTGVIDGAENNWPSFESTKHFEVSKFYSLTEHSLSPEVLVMSKRSFDK 249

Query: 249 LGDKERTALLKAADESMMQMKDVIWPAAEKEAYDKMKGMNATVVDVDKSAFKERVKPLYD 308
           L  +++  +  AA ES+ +M++ +W A EK +  K+K   A +  V+K  F + +KP+YD
Sbjct: 250 LSKEDQEIMKVAAKESVAKMRE-LWDAREKASEAKVKAGGAVINAVEKQPFIDAMKPVYD 308

Query: 309 EF 310
           +F
Sbjct: 309 KF 310