Pairwise Alignments

Query, 306 a.a., drug/metabolite exporter YedA from Escherichia coli Nissle 1917

Subject, 319 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  180 bits (456), Expect = 4e-50
 Identities = 97/288 (33%), Positives = 165/288 (57%), Gaps = 4/288 (1%)

Query: 4   RQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLP 63
           RQ   L GAL  +Y++WG+TYF + + ++S PP++M G RF+ AG+L+L     +G   P
Sbjct: 12  RQTWRLSGALLIVYLVWGTTYFALDVAMQSLPPVLMNGARFVLAGVLMLGIARWQGQAWP 71

Query: 64  PLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIKTRK 123
                  +ALIG L+      +V +A+   + SG+ A VV T+P++   ++R  G +   
Sbjct: 72  TAAQWRASALIGSLMAFAAMALVVLAQKAGIGSGLMATVVTTMPMWLALWTRWGGERVPL 131

Query: 124 LEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSISWAFGSVYGSRITLPVGMMAGAI 183
             W+G+ +G  G ++L   G+ S    G++      ++W+ GS    R+ LP   MA A 
Sbjct: 132 TSWIGLVLGAGGAVLLALEGDFSTTLTGSLCAFGAPLAWSLGSYASRRLNLPPPAMASAA 191

Query: 184 EMLAAGVVLMIASMI--AGEKLTALPSLS--GFLAVGYLALFGSIIAINAYMYLIRNVSP 239
           + L  G++ ++ + +   G +  A   +S    LA  YL + G+++ +NAY++L++N S 
Sbjct: 192 QWLLGGLLGLVVAWVWEPGARSVAWQQVSAASVLAWLYLVVMGTMVTLNAYLWLLKNTSA 251

Query: 240 ALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGK 287
           ALA SY++VNPV+A+ +G  LGGE L+   ++AL VI  A+ L+  G+
Sbjct: 252 ALAGSYSFVNPVIALGVGMWLGGERLTGWVFVALPVIGLALALILYGR 299