Pairwise Alignments

Query, 561 a.a., long-chain-fatty-acid--CoA ligase FadD from Escherichia coli Nissle 1917

Subject, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

 Score =  622 bits (1604), Expect = 0.0
 Identities = 316/555 (56%), Positives = 405/555 (72%), Gaps = 8/555 (1%)

Query: 3   KVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVNMGEVMTFRKLEERSRAFA 62
           K WL  YP  VP+EI      SL+D+ E+S  ++AD+ AF +MG+ +T+R+L+  +RA A
Sbjct: 16  KRWLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVA 75

Query: 63  AYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDSGA 122
           A+LQ   GL+KGDRVA+MMPN+LQ PVA++GILRAGM+VVNVNPLYTPRELEHQL DSGA
Sbjct: 76  AWLQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGA 134

Query: 123 SAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHLPD 182
            A+ ++ NFAH  ++ V KTAV+HV++  MGD L   KG +VN VV+ +K+LVP + +P 
Sbjct: 135 KALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGL-KGHIVNLVVRKVKKLVPAHAIPG 193

Query: 183 AISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNATY 242
           +ISF++ L  G  +      L  +D+AFLQYTGGTTGV+KGA+LTH N+LAN  Q++   
Sbjct: 194 SISFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQISLWL 253

Query: 243 GPLLHPGKEL-----VVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAK 297
               +  K+       + ALPLYHIFALT+N L+ I LGG NLLI NPRDIPG VKEL+ 
Sbjct: 254 DAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELSH 313

Query: 298 YPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGY 357
           Y      G+ TLFNAL+NN+EF++LD SSL    GGGM VQ+ VAERWV + G  + EGY
Sbjct: 314 YQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEGY 373

Query: 358 GLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLG 417
           GL+E +P+ +VN  D    SG+IGLP+ STE  + D+D N +P G+ GE+C++GPQVM G
Sbjct: 374 GLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMAG 433

Query: 418 YWQRPDATDE-IIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQ 476
           YWQRPD T + I  +G+  +GD+  MDE G+ +IVDRKKDMILVSGFNVYPNE+E+V   
Sbjct: 434 YWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAAS 493

Query: 477 HPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCRRQLTGYKVPKLVEFRDEL 536
           HPGV E AA+GVP   SGE VK+FVVKKD SLTE  L  FC + LT YK PK++EFR +L
Sbjct: 494 HPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRTDL 553

Query: 537 PKSNVGKILRRELRD 551
           PKSNVGKILRRELR+
Sbjct: 554 PKSNVGKILRRELRN 568