Pairwise Alignments

Query, 430 a.a., ABC transporter substrate-binding protein from Escherichia coli Nissle 1917

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 65/280 (23%), Positives = 128/280 (45%), Gaps = 17/280 (6%)

Query: 4   SKIVLLSALVSCALISGCKEENKNNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVK 63
           +K ++  ALV  ++ +G    +  +V++     S++++ Q     LI  F   N GI ++
Sbjct: 4   AKFMMTGALVLASVSAGAMAAHAEDVTLTLW--SLDRDIQPA-PNLIKEFNALNNGIKIE 60

Query: 64  QVPVEEDAYNTKVITLSRSGSLPEVIETSH-DYAKVMDKEQLIDRQAVATVISNVGEGAF 122
              ++ D   ++ +    +G+ P++I   + ++A    +   +D   +      +    +
Sbjct: 61  YRQLQFDDVVSESMRAYSTGNAPDIIAIDNPNHAMFASRGAFLDVTDMIAKSDVIKTENY 120

Query: 123 YDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEE---PKNWQQLLDVAQKLN 179
           + G L+ V T DG  + GVP +     ++Y KD+   AGL+    P+ W +L+D A+KL 
Sbjct: 121 FPGPLKSV-TWDGK-YFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDELVDAARKLT 178

Query: 180 DPANKKYGI---ALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRN 236
           +PA   YGI   A    E       ++Q A +   N+ N +G +     E  + L   + 
Sbjct: 179 NPAKNVYGISFSAKANEEGTFQFLPWAQMAGATYKNI-NTDGAV--KALETWKTLLDEKL 235

Query: 237 LAANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKE 276
            + +T+  S    +    F  G A MAI   + +  ++K+
Sbjct: 236 ASPDTLTRSQ--WDSTATFNAGNAAMAISGPWEIDRMLKD 273