Pairwise Alignments

Query, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  550 bits (1416), Expect = e-160
 Identities = 286/595 (48%), Positives = 402/595 (67%), Gaps = 3/595 (0%)

Query: 15  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74
           A+++L++ FGY  FR  Q  II+ V SG D LV+MPTGGGKSLCYQ+PALL +GL VVVS
Sbjct: 5   AQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLAVVVS 64

Query: 75  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 134
           PLI+LM DQV  L   GV+A  LNST + ++Q ++    R  +I++LY+APERL+    L
Sbjct: 65  PLIALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQPRML 124

Query: 135 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 194
             L      L A+DEAHC+SQWGHDFRPEY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 125 AFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRTREEI 184

Query: 195 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 254
           V+ L L +    +SSFDRPNI Y ++ K +P  QL+ ++ E+RG +GI+YC SR KV+D 
Sbjct: 185 VQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKKVDDF 244

Query: 255 AARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 314
           AA L  +G  A  YHAGL N +RA  Q++F  ++  I+VAT+AFGMGI+KPNVRFV H D
Sbjct: 245 AAFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLD 304

Query: 315 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL-QDIERHKLNAM 373
           +P+++E+YYQETGRAGRDGLPA+A + Y   D+ +L++ L      +  + +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHKLDAM 364

Query: 374 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFG 433
            A  E   CRR  LL YF E    PCG+CD C+D  + +D +  A+ ALS I R  QR+G
Sbjct: 365 LALCEETRCRRQALLAYFDEELPSPCGHCDNCVDGVQTWDATEPARQALSAIYRSGQRYG 424

Query: 434 MGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSA 493
           +G++V+V+ G +N ++R  GH  L V+G+G+  +   W S+ RQL+  GL   ++     
Sbjct: 425 VGHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALAETEWRSLFRQLVARGLADVDLDGFGG 484

Query: 494 LQLTEAARPVLRGESSLQLAVP-RIVALKPKAMQKS-FGGNYDRKLFAKLRKLRKSIADE 551
           L+L+++ RP+LRGE SL+L       A KP A   S    + +R+ +  LR LR+ +A+E
Sbjct: 485 LRLSDSCRPLLRGEVSLELRRDLSSKAPKPAASAASQLVRSEERETWEALRTLRRKLAEE 544

Query: 552 SNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRAHVD 606
            +VPPYV+F DATL+EM    P + S+M  ++GVG RKLER+G+ F+ +++ + D
Sbjct: 545 HSVPPYVIFPDATLLEMLRSQPASLSDMAMISGVGARKLERYGQAFLEVLQGNSD 599