Pairwise Alignments

Query, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 636 a.a., ATP-dependent DNA helicase from Sinorhizobium meliloti 1021

 Score =  522 bits (1345), Expect = e-152
 Identities = 273/600 (45%), Positives = 388/600 (64%), Gaps = 10/600 (1%)

Query: 13  SGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVV 72
           S    +L+  +GY  FR  Q+ ++D V++G D +V+ PTG GKSLC+QIPAL   G+ +V
Sbjct: 35  SNPLDLLKRIYGYSTFRGQQQAVVDHVVAGGDAVVLFPTGAGKSLCFQIPALCRRGVGIV 94

Query: 73  VSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDN 132
           VSPLI+LM+DQV+ L+  G+ AA LNS+ TR++ + V       ++ LLY+ PER + D 
Sbjct: 95  VSPLIALMRDQVEALKQLGIRAAALNSSLTRDEAIAVRRALSRDELDLLYVTPERAVTDG 154

Query: 133 FLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQ 192
           F E +A  +  L A+DEAHC+SQWGHDFRPEY  LG L +RFP +P +ALTATAD  TR 
Sbjct: 155 FAEMIADADIALFAIDEAHCVSQWGHDFRPEYRGLGCLAERFPGVPRIALTATADPHTRD 214

Query: 193 DIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVE 252
           D++  LGL    +  SSFDRPNI Y ++E+ +P  QL+R++   +  SGI+YC SRAKVE
Sbjct: 215 DMIERLGLGGARVFASSFDRPNIAYEIVERDQPRQQLLRFLSRFKDASGIVYCLSRAKVE 274

Query: 253 DTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 312
           DTA  L ++GI A  YHAG+E   R   Q+ F +++   +VATVAFGMGI+KP+VR+V H
Sbjct: 275 DTAEWLDAQGIRALPYHAGMERAARDAHQDAFLKEENLCLVATVAFGMGIDKPDVRYVAH 334

Query: 313 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEE--KPQGQLQDIERHKL 370
            D+P ++E+YYQETGRAGRDGLP+E  + Y  AD+   RR ++E   P+ +++ IER KL
Sbjct: 335 LDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPE-EIKRIERAKL 393

Query: 371 NAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQ 430
           N++ A  E   CRR  +L +FGE     CG+CD CL P + +DG+  A  AL+ + R  +
Sbjct: 394 NSLLAICETAGCRRQAILAHFGEAHPGGCGHCDTCLKPVETWDGTEAAIKALAAVYRTGE 453

Query: 431 RFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQ 490
           RFG G++++V+ G+ N++   +GH  + V+G G+D     W S+ RQL+  GL++ + A 
Sbjct: 454 RFGTGHLIDVLTGSVNEKTERFGHVDMPVFGAGKDLPARTWQSIFRQLLAAGLISVDHAA 513

Query: 491 HSALQLTEAARPVLRGESSLQLAVPRIVALKPK-------AMQKSFGGNYDRKLFAKLRK 543
             AL+L   AR V R E  +     R  + K K       A ++S     D +LF +LR 
Sbjct: 514 FGALKLEPEARSVFRRERQVLFRKDRPSSGKAKTARGSKPASERSDLAGSDLELFERLRS 573

Query: 544 LRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRA 603
            R S+A E +VPPYVVF D TLI +A++ P    E+L V G+G  K ER+G+ F+A+I A
Sbjct: 574 ERLSLAREMDVPPYVVFPDTTLIALAKRRPRDFEELLDVPGIGESKRERYGEAFLAVIEA 633