Pairwise Alignments

Query, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 629 a.a., ATP-dependent DNA helicase RecQ (NCBI) from Rhodospirillum rubrum S1H

 Score =  510 bits (1313), Expect = e-149
 Identities = 277/599 (46%), Positives = 372/599 (62%), Gaps = 11/599 (1%)

Query: 15  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 74
           A+ +L + +G++ FRPGQE II  VL G D L VMPTG GKSLCYQ+PAL+  G+T+VVS
Sbjct: 31  ARVLLADIWGFKDFRPGQEAIIRAVLGGEDVLAVMPTGSGKSLCYQLPALMRQGVTLVVS 90

Query: 75  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 134
           PLI+LM+DQV QL A GVAA  LNS+   +    VM G R G+++LLY+APERL   + L
Sbjct: 91  PLIALMRDQVAQLDALGVAAGALNSSIDMDGYRRVMDGLRGGRLKLLYVAPERLARPDTL 150

Query: 135 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 194
             L       LA+DEAHC+SQWGHDFRP+Y  LG++R+    +  +A TATAD  TR DI
Sbjct: 151 SLLRDSGVTALAIDEAHCVSQWGHDFRPDYLCLGKVREDLGGVQTVAFTATADAATRDDI 210

Query: 195 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 254
              L    P + I  FDRPN+R  +  K     ++  +V    G+SG+IYC SRA+ E+ 
Sbjct: 211 AGRLFPAPPRLFIGGFDRPNLRLAMRPKGDTRRRMFEFVAAHTGESGVIYCGSRARTEEL 270

Query: 255 AARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 314
           A  L+  G  A  YHAGL+  VR   Q+ F  +D  ++VATVAFGMGI+KP+VRFV H D
Sbjct: 271 AEGLRGAGHRALPYHAGLDKPVRDANQDAFLAEDGLVMVATVAFGMGIDKPDVRFVCHAD 330

Query: 315 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQD-IERHKLNAM 373
           +PR+IE+YYQE GRAGRDGL A+ + FY   D+   R  +EE   G  Q  +E  +LNA+
Sbjct: 331 MPRSIEAYYQEIGRAGRDGLAADTLTFYGLDDVRLHRMRIEESQAGDEQKRVEIQRLNAL 390

Query: 374 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFG 433
            A  EA  CRR  LL YFGE R EPCGNCD+C++  + +DG+ +AQ A+S + R  QRF 
Sbjct: 391 LALCEAPRCRRQTLLGYFGE-RTEPCGNCDLCINGVESFDGTIEAQKAMSAMLRTGQRFA 449

Query: 434 MGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSA 493
             +++ ++ G     I  YGHDKL  +G+G+D +   W S+ RQ+   GL++ +IA H  
Sbjct: 450 TEHLINILVGTQTDAITQYGHDKLPTFGVGKDHTRNVWRSIFRQISAGGLISLDIANHGR 509

Query: 494 LQLTEAARPVLRGESSLQLAVPRIVAL-----KPKAMQKSFGGNY----DRKLFAKLRKL 544
             +TEA R VLRG++ + L    + A      K K  + S         DR LF  LR  
Sbjct: 510 WLMTEAGRAVLRGQAGVALRSDVLEAAGRGERKDKERRASAPAVQLEADDRALFDALRAK 569

Query: 545 RKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIRA 603
           R+ +A   NVP YVVF D TLIE+A + P +   M  ++G+G  KL R+G  F+ +I A
Sbjct: 570 RQELARAENVPAYVVFADRTLIELATKRPPSLDAMREIHGIGQSKLARYGAAFLEVITA 628