Pairwise Alignments

Query, 611 a.a., ATP-dependent DNA helicase RecQ from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 612 a.a., ATP-dependent DNA helicase RecQ from Dechlorosoma suillum PS

 Score =  560 bits (1443), Expect = e-164
 Identities = 299/616 (48%), Positives = 408/616 (66%), Gaps = 30/616 (4%)

Query: 10  NLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGL 69
           N  + A ++L   FGY  FR  Q +I+  V  G D LV+MPTGGGKSLCYQIPALL +G 
Sbjct: 4   NTHTAALEILHRVFGYTAFRGSQGDIVGHVADGGDALVLMPTGGGKSLCYQIPALLRHGC 63

Query: 70  TVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLM 129
            VV+SPLI+LM+DQVD L   GV AA LNST   +Q  EV      G + LLY+APERL+
Sbjct: 64  GVVISPLIALMQDQVDALTQLGVKAAYLNSTLDWQQVQEVERRVLCGDLDLLYVAPERLL 123

Query: 130 LDNFLEHLAHWNP----VLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTAT 185
            D  L  L          L A+DEAHC+SQWGHDFRPEY  L  L  R+P +P +ALTAT
Sbjct: 124 TDRCLSLLDKLEEDKRLALFAIDEAHCVSQWGHDFRPEYLQLSALHNRYPDVPRIALTAT 183

Query: 186 ADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYC 245
           AD  TR+++   LGL +  + ++SFDRPNIRY+++EK  P  QL+ ++   +G++GI+YC
Sbjct: 184 ADTATREEMRVRLGLTEARVFVASFDRPNIRYLIVEKDNPRKQLLAFLANHKGEAGIVYC 243

Query: 246 NSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKP 305
            SR KVE+TAA L S+GI A  YHAGL   VRAD Q  F R++   +VAT+AFGMGI+KP
Sbjct: 244 LSRKKVEETAAWLTSQGIPALPYHAGLPAEVRADNQRTFLREEGITMVATIAFGMGIDKP 303

Query: 306 NVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEK--PQGQLQ 363
           +VRFV H D+P+++E+YYQETGRAGRDG PAEA + Y   D+   R  +E+   P+ Q +
Sbjct: 304 DVRFVAHLDLPKSLEAYYQETGRAGRDGEPAEAWMAYGLQDVVLQRSRIEDSVAPEEQ-K 362

Query: 364 DIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALS 423
            +E  KLNA+ A+AE+  CRR+VLL+YFGE   EPC NCD+CL PP+ +DG+  AQ ALS
Sbjct: 363 RLEAQKLNALLAYAESPRCRRVVLLDYFGEA-SEPCNNCDVCLTPPELWDGTVAAQKALS 421

Query: 424 TIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGL 483
            + R  QRFG+ ++++V+RG  + +++ +GHD L  +G+G D     W +V RQL+  G+
Sbjct: 422 VVYRTGQRFGVVHLIDVLRGKVSDKVKQWGHDALPTFGVGADLDDGAWRAVFRQLVAGGM 481

Query: 484 VTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGN----------- 532
           +T ++A+H A++LT+AARPVLRGE +LQ+   R VA K      S GG+           
Sbjct: 482 LTADLAEHGAMKLTDAARPVLRGEQTLQMR--RHVARK----GGSGGGSKSRSERAPTKL 535

Query: 533 -----YDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGM 587
                 D+ LF  LR+ R + A E  VP YV+ +D TL E+AE+ P T  ++++++G+G 
Sbjct: 536 DDMTLEDQSLFEDLRQWRAATAKEQGVPAYVILHDKTLKELAEERPTTRDQLMNISGMGT 595

Query: 588 RKLERFGKPFMALIRA 603
            KLER+G   + +IRA
Sbjct: 596 AKLERYGDDLLGIIRA 611