Pairwise Alignments

Query, 928 a.a., DNA polymerase I from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 914 a.a., DNA polymerase I from Pseudomonas stutzeri RCH2

 Score = 1102 bits (2851), Expect = 0.0
 Identities = 574/925 (62%), Positives = 696/925 (75%), Gaps = 15/925 (1%)

Query: 6   QNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLIMQYKPTHAAVVFDAK 65
           Q PLILVDGSSYLYRA+HA PPLT S G+PTGA+ GVLNML SL  QY  +  AVVFDAK
Sbjct: 3   QAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFDAK 62

Query: 66  GKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGTLAREA 125
           G TFRD LFE+YKSHRPPMPDDLR+Q+EPLHA V+A+G+PLL V GVEADDVIGTLAR+ 
Sbjct: 63  GPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLARQC 122

Query: 126 EKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVVNKYGVPPELIIDFLALMGD 185
              GR V+ISTGDKDMAQLV P++TL+NTMT ++   E V  K+GV PELIIDFLALMGD
Sbjct: 123 AALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALMGD 182

Query: 186 SSDNIPGVPGVGEKTAQALLQGL-GGLDTLYAEPEKIAGLSFRGAKTMAAKLEQNKEVAY 244
             DNIPGVPGVGEKTA  LL G+ GGL  LY   +++AGL  RGAK++ AKL ++++ A+
Sbjct: 183 KVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDAAF 242

Query: 245 LSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKKYEFKRWTADVEAGKWLQAKGAKP 304
           +SY+LATIK DV L++    L   +P  E L+ L+++ EFK W  D+   +  +A G   
Sbjct: 243 MSYELATIKIDVPLDVEVGDLMPGEPHREALIALYRELEFKNWLDDLL--REAKAAGENC 300

Query: 305 AAKPQETSVADEAPEVTATVISYDNYVTILDEETLKAWIAKLEKAPVFAFDTETDSLDNI 364
             +P+  S+  EA            Y T+L++   + W+ +L+ A  FAFDTET S+D  
Sbjct: 301 EVQPEGCSIQAEA-----------QYETLLEQADFERWLDRLKTAECFAFDTETTSIDAQ 349

Query: 365 SANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERALELLKPLLEDEKALKVGQNLKYD 424
            A LVG+SFAIEPG AAY+P+ H Y+  P Q+  +  L  LKPLLED    K+ Q+ KYD
Sbjct: 350 RAELVGVSFAIEPGQAAYVPLRHSYMGVPQQLELDAVLAALKPLLEDPAKTKICQHGKYD 409

Query: 425 RGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSLAERWLKHKTITFEEIAGKGKNQL 484
             +L +YGIE+RG+ FDTMLESY+L++ A RHDMDSLA ++L   TI FE+IAGKG  QL
Sbjct: 410 MNVLMHYGIEMRGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQL 469

Query: 485 TFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNG 544
           TF+QIA+E+AG YAAEDADVTL+LH  +   L++    L V   IEMPLVPVL+RIERNG
Sbjct: 470 TFDQIAIEQAGPYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNG 529

Query: 545 VKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPG 604
             +D ++L   S EL  +L +LE++A EIAGEEFNL S KQL  IL++K G   + KT G
Sbjct: 530 ALVDAQLLGQQSVELGDKLVQLEREAFEIAGEEFNLGSPKQLCAILYDKLGCPVISKTAG 589

Query: 605 GAPSTSEEVLEELA-LDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTRRVHTSYHQAV 663
           G PST+E VL ELA  DYPLPKVI+++R L+KLK TYTDKLP  INP+T R+HTSYHQAV
Sbjct: 590 GQPSTAESVLAELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAV 649

Query: 664 TATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGL 723
           TATGRLSS+DPNLQNIP+R  EGRRIRQAF+A   Y +++ADYSQIELRIMAHL++D GL
Sbjct: 650 TATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGL 709

Query: 724 LTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKE 783
           L AF    D+HRATAAEVFG+PLE V+++QRRSAKAINFGLIYGMSAFGLA+Q+++ RKE
Sbjct: 710 LHAFQNDLDVHRATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKE 769

Query: 784 AQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAA 843
           AQ+Y+D YF RYPGVL YMERTR QA EQGYVETL GRRLYLP+I S NGA R  AER A
Sbjct: 770 AQEYIDRYFARYPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTA 829

Query: 844 INAPMQGTAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQL 903
           INAPMQGTAADIIKRAMIAVD WLQ      R+I+QVHDELV EV +D V+ V + I  L
Sbjct: 830 INAPMQGTAADIIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVREAICPL 889

Query: 904 MENCTRLDVPLLVEVGSGENWDQAH 928
           M    +LDVPLLVE G G NWD+AH
Sbjct: 890 MSGAAQLDVPLLVEAGVGNNWDEAH 914