Pairwise Alignments

Query, 928 a.a., DNA polymerase I from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 868 a.a., DNA polymerase I from Marinobacter adhaerens HP15

 Score =  949 bits (2453), Expect = 0.0
 Identities = 500/888 (56%), Positives = 636/888 (71%), Gaps = 21/888 (2%)

Query: 42  VLNMLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKA 101
           +++MLR L   +  +   VVFDAKGKTFR +L+E YK++RPPMP+DL  QIEP+H +VKA
Sbjct: 1   MISMLRRLEQDFPGSKMVVVFDAKGKTFRHDLYEEYKANRPPMPEDLACQIEPIHEIVKA 60

Query: 102 MGLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTILG 161
           MGLPLL V+GVEADDVIGTLA EA   G  V++STGDKDMAQLV+ ++TLINTMT T + 
Sbjct: 61  MGLPLLTVTGVEADDVIGTLANEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETRMD 120

Query: 162 PEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKI 221
            + VV K+GV PE I+D+LAL+GD  DNIPGV   G KTA   LQ    LD +    ++I
Sbjct: 121 RDGVVEKFGVTPEQIVDYLALVGDKVDNIPGVNKCGPKTAVKWLQSYDNLDNVIEHADEI 180

Query: 222 AGLSFRGAKTMAAKLEQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELLGLFKK 281
            G        +   L    E   LS +LATI+TDVEL+   E L++++   ++LL LF++
Sbjct: 181 KG-------KIGEYLRDATETLPLSRELATIRTDVELDFGLEDLKLREQDDQQLLELFRE 233

Query: 282 YEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTILDEETLKA 341
           YEF+ W A++E  +   +  A+           DE P+         +Y  I D++ L  
Sbjct: 234 YEFRSWIAELEEDESSSSSNAR---------AGDETPKPET---GEKDYSIITDQKELDQ 281

Query: 342 WIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDAPDQISRERA 401
           W+ +L  A +FAFDTET SL  + A +VG+SFA++PG AAY+P+ HDY+ AP+Q+ R++ 
Sbjct: 282 WLERLGAAELFAFDTETTSLRYMDAEIVGVSFAVKPGEAAYVPLGHDYMGAPEQLDRDQV 341

Query: 402 LELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILNSVAGRHDMDSL 461
           L+ LKPLLE+    KVGQNLKYD+ +LAN+GI L GIA DTMLESY+LNSVA RHDMDSL
Sbjct: 342 LDQLKPLLENPDLAKVGQNLKYDKNVLANHGITLEGIAEDTMLESYVLNSVATRHDMDSL 401

Query: 462 AERWLKHKTITFEEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPDLQKHKG 521
           A  +L  KT +FE IAGKG  QLTFNQI LE+A  YAAEDAD+TL+LH  + P L++   
Sbjct: 402 AMYYLGEKTTSFESIAGKGAKQLTFNQIDLEKAAPYAAEDADITLRLHQTLRPKLKETGK 461

Query: 522 PLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAELEKKAHEIAGEEFNLS 581
              V+E+I++PLVPVLSR+E+ G  I    L  HS+EL  R+AELEK+AHE+AGE FNL 
Sbjct: 462 LAAVYEDIDLPLVPVLSRMEQRGTLISASTLRQHSQELAERMAELEKEAHEVAGETFNLG 521

Query: 582 STKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYT 641
           STKQLQ I ++K G+  +KK                  +    +VILE+R L+KLKSTYT
Sbjct: 522 STKQLQAIFYDKMGLPVIKKPQRARRQQRSRCFRNSPTNTNC-RVILEHRSLSKLKSTYT 580

Query: 642 DKLPLMINPKTRRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVI 701
           D LP +I+ +T RVHTSYHQAVTATGRLSS++PNLQNIP+R+E+GRRIRQAFIAPE Y +
Sbjct: 581 DTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNIPIRSEQGRRIRQAFIAPEGYKL 640

Query: 702 VSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLETVTSEQRRSAKAIN 761
           V+ADYSQIELRIMAHLS DKGLL AF +G+DIH+ATA+EVFG+ L+ V+S+QRRSAKAIN
Sbjct: 641 VAADYSQIELRIMAHLSGDKGLLKAFEKGEDIHKATASEVFGVSLDDVSSDQRRSAKAIN 700

Query: 762 FGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGR 821
           FGLIYGMSAFGL+RQL++ RK AQ+Y+D YFERYPGVL+YM+  R QA + G+VETL GR
Sbjct: 701 FGLIYGMSAFGLSRQLDVERKLAQEYIDRYFERYPGVLKYMDNIRKQAHDDGFVETLFGR 760

Query: 822 RLYLPDIKSSNGARRAAAERAAINAPMQGTAADIIKRAMIAVDAWLQAEQ-PRVRMIMQV 880
           RLYLP+I + N   + AAER AINAPMQGTAADIIKRAM+ V+ WL  E     RM MQV
Sbjct: 761 RLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRAMVDVENWLLKEHADEARMTMQV 820

Query: 881 HDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPLLVEVGSGENWDQAH 928
           HDEL+ EV +  +D +   + + M     LDVPLLVE G G+NWD+AH
Sbjct: 821 HDELILEVKESALDKIRSGLEKRMSAAAELDVPLLVEAGVGDNWDEAH 868