Pairwise Alignments

Query, 732 a.a., 'Primosomal protein N'' transl_table=11 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 740 a.a., primosomal protein N' from Pseudomonas stutzeri RCH2

 Score =  709 bits (1829), Expect = 0.0
 Identities = 374/736 (50%), Positives = 495/736 (67%), Gaps = 9/736 (1%)

Query: 3   VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNE 59
           +  +ALP PL R FDYL P G++   ++ G R+RVPFG++ E +G++V +SD SE+P+ +
Sbjct: 5   ILRLALPSPLRRLFDYLPPAGVSRAALQPGVRLRVPFGRR-EVVGILVELSDQSEVPVEK 63

Query: 60  LKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119
           LK  +E+LD +P     +++L LW A YY H +GD L  ALP+LLRQG PA      YW 
Sbjct: 64  LKPALELLDAKPPLPAPLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQERYWR 123

Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLA 177
             E G + +   L R+PKQ++AL A+ Q    +    ++ L+ N  +L  L +KGL  + 
Sbjct: 124 LAE-GASPEDPRLARAPKQREALKAIAQHAHGLPHALLSKLQLNKDSLDLLLEKGLVHIE 182

Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237
           S   + S   +   +    L LN +Q  A  A+ +    F A+LLAGVTGSGKTEVYL +
Sbjct: 183 SRRSKPSRGHSGSWLLQAELTLNAQQRAAFEAVSAGLGGFQAFLLAGVTGSGKTEVYLQL 242

Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297
           +  VL  GKQALV++PEI L PQT+ARF +RFNA + +LHS +ND +RL AWL A++GEA
Sbjct: 243 IHRVLEAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNVNDRDRLDAWLAARDGEA 302

Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357
            I+IGTRSALFTP KN G+I+IDEEHD+SYKQQEG RYHARDLA+ RA  E +PI+LGSA
Sbjct: 303 DIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLGSA 362

Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417
           TP+LE+L N    +Y LL+LT+RAGNA+      LD+K + + AG++  L   + Q L A
Sbjct: 363 TPSLESLHNAHSGRYALLKLTQRAGNAQSPRFLRLDVKSRPLDAGISGPLQQAIGQTLAA 422

Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477
             QV+++LNRRGFAP LLCHDCGW+++CPRCD   TLHQ  + LRCHHC      PR CP
Sbjct: 423 GQQVLIYLNRRGFAPTLLCHDCGWLSQCPRCDARMTLHQRHNELRCHHCGHVERPPRNCP 482

Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537
            CG   L PVG GTE+ E+ L  LFP  P+ RIDRD+T+RKGA+EQ +  ++RG   +L+
Sbjct: 483 DCGKVDLRPVGAGTERAEERLGILFPDYPVLRIDRDSTARKGAMEQMIGTINRGEPCLLV 542

Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597
           GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQL  QVAGRAGRA + G+V++Q
Sbjct: 543 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 602

Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657
           TH  +HPLL  L  +GY AFAEQAL+ERR   LPP++   ++RAE      A  FL    
Sbjct: 603 THLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDDAC 662

Query: 658 NLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715
           +L   L   L    + +LGPVPA   +R GR+R Q+LLQ  +R  L  +++     +  +
Sbjct: 663 SLAEQLLEQLQLNGVELLGPVPAPMERRAGRYRAQLLLQGNARATLHRLMDIWTPTLEQL 722

Query: 716 PDSRKVKWVLDVDPIE 731
           P SR V+W LDVDPI+
Sbjct: 723 PGSRAVRWSLDVDPID 738