Pairwise Alignments

Query, 732 a.a., 'Primosomal protein N'' transl_table=11 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 734 a.a., primosomal protein N' from Vibrio cholerae E7946 ATCC 55056

 Score =  771 bits (1991), Expect = 0.0
 Identities = 396/728 (54%), Positives = 505/728 (69%), Gaps = 3/728 (0%)

Query: 3   VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNELKA 62
           +A V LPVPL ++FDYL+P  +    G RV+VPFG+Q   +G+V S++  S+ P+ +LK+
Sbjct: 5   IARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQT-LVGIVQSLTHQSDFPIEQLKS 63

Query: 63  VVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122
           V  VLD  PV+   +  LL W + +YH+P+G+   +ALP  LR+G+ A       W  T 
Sbjct: 64  VQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANALPGALRKGKAAELTSHKEWRLTA 123

Query: 123 QGQAVDLNSLKRSP-KQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181
            GQ   +  +KR   KQ Q L  L+ G +    +   E +   L+AL +KG  +     P
Sbjct: 124 LGQEQLMQGVKRGAVKQAQVLHLLQHGALSHQTLLDEEVSSTTLKALVEKGWIECEERKP 183

Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241
               W        ++ RLN EQA A+ A++S    F  +LL GVTGSGKTEVYL+++  V
Sbjct: 184 VARPWPQELEAKVDKPRLNQEQAIAIAAVNSQQG-FGCFLLEGVTGSGKTEVYLNLITPV 242

Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301
           LA+G+QALV+VPEIGLTPQTI RFR+RFN PVEV+HS LND+ERL+AWL A++  A IVI
Sbjct: 243 LARGEQALVLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGIVI 302

Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361
           GTRSAL TPF  LG+I++DEEHDSSYKQQ+  RYHARD+AV RAH E IPI+LGSATPAL
Sbjct: 303 GTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLENIPIVLGSATPAL 362

Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421
           ETL N    KY  L+LT+RAGNA P   H LD+KG  +++GL+  LI  MR+HL A NQV
Sbjct: 363 ETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYLESGLSAPLIAEMRRHLSAGNQV 422

Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481
           +LFLNRRGF+PAL+CH+CGWIAEC RCD YYT HQ  + +RCHHC SQRPV  QC  CGS
Sbjct: 423 MLFLNRRGFSPALMCHECGWIAECQRCDAYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGS 482

Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541
           T LV VG+GTEQLE  L  LFP     RIDRD+T RKG+LE  L  + +G  +ILIGTQM
Sbjct: 483 TQLVTVGVGTEQLEAQLHTLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQM 542

Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601
           LAKGHHFPDVTLVALLDVDG+L+S+DFR++ER AQL+ QVAGRAGRA K GEVVLQTHHP
Sbjct: 543 LAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHP 602

Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661
           EH LLQ LL+K Y  FA  AL ER++ QLPP++   + RAE ++      FL+Q+R  + 
Sbjct: 603 EHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQVEDFLRQVRETLR 662

Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721
            +P  D +  VLGP PA   KR G++RWQ+LLQ P+R  +Q I+      +  +P + KV
Sbjct: 663 CNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRTLMQKILQSARPALQQLPLASKV 722

Query: 722 KWVLDVDP 729
           +W +D+DP
Sbjct: 723 RWSIDIDP 730