Pairwise Alignments

Query, 732 a.a., 'Primosomal protein N'' transl_table=11 from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 734 a.a., primosome assembly protein PriA from Sinorhizobium meliloti 1021

 Score =  373 bits (958), Expect = e-107
 Identities = 249/735 (33%), Positives = 378/735 (51%), Gaps = 29/735 (3%)

Query: 3   VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNELKA 62
           V  V +P+P PR + Y +P+GM V+ G  V+VP G +   +GVV    D   +   +LK 
Sbjct: 17  VVPVLVPMPAPRAYSYAVPDGMAVEPGSIVQVPLGPRFV-VGVVWDGEDDGGVDPKKLKQ 75

Query: 63  VVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122
           + +V D  P+    +   L W A Y   P G V+  AL    R        PM      E
Sbjct: 76  IEKVFDCPPLGP-DMRAFLDWVAAYTLTPPGLVVRMAL----RAPTAFDPEPM-----VE 125

Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIW-RDQVA-TLEFNDAALQALRKKGLCDLASET 180
             +  ++   + +  +++ LA    G  W R  +A     + + +  L  +G+ +     
Sbjct: 126 ALRLTEMRPERMTAARERVLATASDGLSWTRSGLAHAAGVSSSVIDGLTSQGVFETVFMP 185

Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240
           P       + A +  RL    +QA A          FS  L+ G+TGSGKTEVY   +  
Sbjct: 186 PPPVVAAPDPAFAAPRLEGPQKQAAADLLAAVEERKFSVSLIDGITGSGKTEVYFEAIAA 245

Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300
            L  GKQ L+++PEI LT   + RF++RF A     HS L    R   W +   G+  +V
Sbjct: 246 TLRAGKQVLILLPEIALTASFLERFQDRFGAKPAEWHSDLAPRMREKVWRQVTTGQVRVV 305

Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360
            G RSALF PF++LG+I++DEEHD +YKQ++   Y+ARD+AV R      P++L SATP+
Sbjct: 306 AGARSALFLPFEDLGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRIGNFPVVLVSATPS 365

Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQAD 418
           +E+  N +  +YR + L  R G+A      ++D++    + G  L+P L+ ++ + +   
Sbjct: 366 VESRVNGEVGRYRPIHLPTRFGDAALPDLGIVDMRRHPPERGGFLSPVLVNQIGKTIGRR 425

Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478
            Q +LFLNRRG+AP  LC  CG   +CP C  +   H+ +  ++CHHC      P  CP 
Sbjct: 426 EQALLFLNRRGYAPLTLCRVCGHRFQCPDCSSWLVEHRFRGQIQCHHCGYSERTPEACPE 485

Query: 479 CGS-THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537
           CG+  HLV  G G E++ + +   FP      +  D    K  L  +L  + RG A I+I
Sbjct: 486 CGTLDHLVACGPGVERIAEEVERHFPDARTIVLSSDLMGVK-RLRLELEAIARGEADIVI 544

Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597
           GTQ++AKGH+FP++TLV ++D D  L + D R+AER  QL +QV GRAGR G +   +LQ
Sbjct: 545 GTQLVAKGHNFPNMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGLKSLGLLQ 604

Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW--TSHVIVRAEDHNNQHAPLFLQQ 655
           T+ P+HP++Q ++    DAF E+ + ER    LPP+   + VIV A+   +         
Sbjct: 605 TYQPQHPVMQAIVSGDSDAFYEREIHERERAVLPPFGRLASVIVSADTRGDAEG-----H 659

Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715
            R L  ++P  D  + +LGP  A      GR R+++L+       +Q  +    A+I   
Sbjct: 660 ARGLRNAAPRVD-GIAILGPAEAPLALIRGRHRFRLLVHGRRNSDMQSFVR---AMIAAG 715

Query: 716 PDSR-KVKWVLDVDP 729
           P  R  V   LD+DP
Sbjct: 716 PKERGSVSVQLDIDP 730