Pairwise Alignments

Query, 223 a.a., Endonuclease V from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 242 a.a., Deoxyinosine 3'endonuclease (endonuclease V) from Pseudomonas stutzeri RCH2

 Score =  203 bits (517), Expect = 2e-57
 Identities = 115/208 (55%), Positives = 139/208 (66%), Gaps = 4/208 (1%)

Query: 7   RAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEVTRAAMVLLKYPSLELVEYKVAR 66
           RA Q+ LAS V  +D  D  P  LIAG DVGFE+GG +TRAA VLL   +LELV   +AR
Sbjct: 23  RAMQLALASQVRLQD--DFPPLRLIAGVDVGFEEGGSITRAAAVLLDADTLELVGSSLAR 80

Query: 67  IATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFVDGHGISHPRRLGVASHFGLMVDVP 126
           I T MPYIPG LSFRE PA+L A   L   PDL+F DGHGI+HPRRLG+A+H G++  +P
Sbjct: 81  IPTNMPYIPGLLSFRELPAVLQALAELPAVPDLIFSDGHGIAHPRRLGIAAHLGVVTGLP 140

Query: 127 TIGVAKKRLCGKFEPLSSEPGALAPLMDK--GEQLAWVWRSKARCNPLFIATGHRVSVDS 184
           TIGVAKK L G+ + L    GA   L DK  GE +  V RSK +  PL I+ G+RVS+ +
Sbjct: 141 TIGVAKKLLTGEHDELDLTRGAQVALRDKKSGEVIGCVLRSKDKVRPLIISPGNRVSIAT 200

Query: 185 ALAWVQRCMKGYRLPEPTRWADAVASER 212
           A   V R +  YRLPEPTR AD +AS R
Sbjct: 201 APELVMRYLTRYRLPEPTRLADRLASRR 228