Pairwise Alignments

Query, 396 a.a., Maltose-binding periplasmic protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 409 a.a., substrate-binding protein of a sugar uptake ABC transporter system from Sinorhizobium meliloti 1021

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 77/295 (26%), Positives = 120/295 (40%), Gaps = 34/295 (11%)

Query: 1   MKIKTGARILALSAL-TTMMFSASALAKIEEGKLVIWINGDKGYNGLAEVG-KKFE-KDT 57
           M I   A  L L+ L +T + S +A A  +E   + WI      + + E   K++E K+ 
Sbjct: 1   MTIAYKATFLTLALLGSTALGSVAAQAADQE---ISWIYCGDTIDPIHEKYIKEWEGKNP 57

Query: 58  GIKVTVEHPD--KLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKL 115
           G KVT E     + ++K   +A  G    + +        +A++ L+  +   +  +   
Sbjct: 58  GWKVTPEVVGWAQCQDKATTLAVAGTPVGMAYVGSRALKEFAENELIVPVPMTEDEKKGY 117

Query: 116 YPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPN-------PPKTWEEIPALDKELKAK 168
           YP   D V + G     PIA    +L +NKDL          PPKTW E  A  K++K K
Sbjct: 118 YPNIVDTVTFEGTQWGVPIAFSTKALYWNKDLFKQAGLDPEVPPKTWAEEIAFAKQIKEK 177

Query: 169 ------GKSALMF-NLQEPYFTWPLIAADGGYAFKYENGK-YDIKDVGVDNAGAKAGLTF 220
                 G  A  F N    +  W              NGK  D  ++ +D+    A L  
Sbjct: 178 TGIAGYGLPAKTFDNTMHQFMHWVYT----------NNGKVIDGDNIVIDSPEVLAALQA 227

Query: 221 LVDLIKNKHMNADT-DYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLP 274
             D+       A   + +   A F  G+  M  +G  A + +  +KVN+GV  LP
Sbjct: 228 YKDITPFSVEGATAYEQNEIRAIFLDGKVGMIQSGSGAAARLKETKVNWGVAPLP 282