Pairwise Alignments

Query, 178 a.a., Single-stranded DNA-binding protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 220 a.a., single-strand binding protein (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (474), Expect = 1e-52
 Identities = 112/224 (50%), Positives = 139/224 (62%), Gaps = 50/224 (22%)

Query: 1   MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL 60
           MASRGVNKVILVGNLG+DPEVRYMPNG AVAN T+ATSESW+D+  G+M+E+TEWH +V+
Sbjct: 1   MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQ-QGQMQERTEWHNIVM 59

Query: 61  FGKLAEVASEYLRKGSQVYIEGQLRTRKWTD-QSGQDRYTTEVVVNVGGTMQML------ 113
           + +LAE+A EYL+KGS+VY+EG+L+T KW D Q+GQDRY TE+ VN    MQML      
Sbjct: 60  YRRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQQTGQDRYKTEINVN---EMQMLDSRGQG 116

Query: 114 ----GGRQGGGAPAGGNIGGGQ---------------PQGGWGQPQ-----------QPQ 143
               GG+QG GAP   N    Q               PQGG+G  Q           QPQ
Sbjct: 117 QGGQGGQQGYGAPQQQNQYAPQQSAPAARPQQPQHSAPQGGYGAQQQAAPQQQGYGAQPQ 176

Query: 144 GGNQFSGGAQSRPQQSAP-AAPSNEPPMDF--------DDDIPF 178
               ++   Q+ PQQ AP   P+ +P  +F        DDDIPF
Sbjct: 177 QAPAYAPKPQAAPQQQAPQQRPAPQPQQNFTPDLDDGWDDDIPF 220