Pairwise Alignments

Query, 178 a.a., Single-stranded DNA-binding protein from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 238 a.a., single-strand binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  213 bits (541), Expect = 3e-60
 Identities = 114/176 (64%), Positives = 133/176 (75%), Gaps = 11/176 (6%)

Query: 1   MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVL 60
           MASRGVNKVILVGNLGQDPEVRYMPNG AVANIT+ATSESW+D+  G+ +E+TEWHRVVL
Sbjct: 1   MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQ-GQQQERTEWHRVVL 59

Query: 61  FGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEVVVNVGGTMQMLGGRQGGG 120
           FGKLAE+  EYLRKGSQVY+EG+L+TRKW DQSGQDRY+TEVV++  G+MQMLG R  GG
Sbjct: 60  FGKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGSRNQGG 119

Query: 121 APAGGNIGGGQPQGGWGQ--PQQ-PQGGNQFSGGAQSRPQQSAPA----APSNEPP 169
               G   GG PQ G  Q  PQQ     NQ++   Q+ P   APA    +  N+PP
Sbjct: 120 Q---GAPMGGMPQNGGYQSAPQQAAPAQNQYAPAPQAAPAYQAPAPQPQSGYNQPP 172