Pairwise Alignments

Query, 315 a.a., HTH-type transcriptional regulator TreR from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 340 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 91/309 (29%), Positives = 140/309 (45%), Gaps = 21/309 (6%)

Query: 7   IKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQSDKVVA 66
           IKD+A L+GV +STVSR++N E    + TR +VE  M Q  + PS  AR++   S  ++ 
Sbjct: 4   IKDVAELAGVNRSTVSRIINGEGKFKEETRRKVEQAMAQLNYRPSAIARSLATSSSNMMG 63

Query: 67  IIVTRLDS--LSENL-AVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVV 123
           ++VT        E +  VQT L   ++     I  +   S Q   E +        DG V
Sbjct: 64  LLVTYYTGGFFGEMMEQVQTELDMHHK---FLITAQGHHSAQGEREAIQRFHDLRCDGYV 120

Query: 124 LFGFTGITEEM--LAHWQSSLVLLARDAKGFASVC--YDDEGAIKILMQRLYDQGHRNIS 179
           L       +++  LA   +  VLL R   G    C  +D  GA +I+++ L  QGHR I+
Sbjct: 121 LHSRYLSDDDLRALAQQPTPFVLLDRYVAGLEERCITFDHRGASQIVVEYLIQQGHRKIA 180

Query: 180 YLGVP-HSDVTTGKRRHEAYLAFCKAHKLNPVAAL---PGLAMKQGYENVAKVIT--PET 233
            +  P H      + R + YL       + P  +L        K GY  + ++    PE 
Sbjct: 181 CITGPLHRH--NSRLRQQGYLDALAQAGILPSKSLCEEGNYGRKSGYFAMQQLFARHPEI 238

Query: 234 TALLCATDTLALGASKYLQEQRI---DTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQ 290
           TA+   ++ +  GA +YL EQ I     + + S  +  L + L+P +  V    +E  R 
Sbjct: 239 TAVFSCSEEMTTGALQYLHEQGIAVPGRISIVSFDSVDLCESLYPTVTAVHFPISEMARA 298

Query: 291 AACQLIAQV 299
           A   LIA V
Sbjct: 299 AVQSLIAMV 307