Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 453 a.a., DNA repair protein RadA from Pseudomonas stutzeri RCH2

 Score =  564 bits (1454), Expect = e-165
 Identities = 289/457 (63%), Positives = 352/457 (77%), Gaps = 12/457 (2%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRL--AASPTVARNERLSGYAGSA 58
           MAKA KR + C ECG+ +P+W GQC  C AWNT+ E  +  AA P        SG AG A
Sbjct: 1   MAKA-KRMYGCTECGSTFPKWAGQCGDCGAWNTLVETVIEGAAPP--------SGRAGWA 51

Query: 59  GV-AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLC 117
           G  A ++ L+++S+EE+PRFST   E DRVLGGG+V GS +LIGG+PG GKST+LLQTLC
Sbjct: 52  GEQANIRTLAEVSVEEVPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLC 111

Query: 118 KLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVID 177
            +AQ    LYVTGEES QQVAMRA RL LP D L +++ET IE I   A  E+PK+MVID
Sbjct: 112 AIAQHYPALYVTGEESQQQVAMRARRLDLPQDKLKVMTETCIESIIATARLEKPKVMVID 171

Query: 178 SIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCI 237
           SIQ +    +QS+PG VAQVRE+AA L RFAK  G AI +VGHVTK+G+LAGP+VLEH +
Sbjct: 172 SIQTIFTEQLQSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMV 231

Query: 238 DCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSG 297
           D  +  +G++D R R LR+ KNRFGA+NELGVF MT++GL+EV+NPSAIFL+R  E   G
Sbjct: 232 DTVLYFEGESDGRLRLLRAVKNRFGAINELGVFGMTDKGLKEVTNPSAIFLTRAQEAVPG 291

Query: 298 SSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQD 357
           S VM  WEGTRP+LVE+QALVD S +ANPRRV +GL+QNRLA+LLAVLHRHG +   DQD
Sbjct: 292 SVVMATWEGTRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGSIPTYDQD 351

Query: 358 VFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERIS 417
           VF+NVVGGVKV ET+ADLAL+ A++SSLR+RPL  DL+VFGEVGL+GEIRPVPSGQER+ 
Sbjct: 352 VFINVVGGVKVLETAADLALMAAVISSLRNRPLDTDLLVFGEVGLSGEIRPVPSGQERLK 411

Query: 418 EAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454
           EAAKHGF+RAIVP  N PK+AP G+QI  V +L  AL
Sbjct: 412 EAAKHGFKRAIVPKGNAPKEAPAGLQIIAVTRLEQAL 448