Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

 Score =  739 bits (1908), Expect = 0.0
 Identities = 370/460 (80%), Positives = 422/460 (91%), Gaps = 2/460 (0%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV 60
           M KA KRA+VCNECGAD+PRWQGQC+AC +WN+I+EVRLAASP VARNERL GYAG+   
Sbjct: 1   MVKA-KRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALE- 58

Query: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120
           AKVQ L+DI L+E+PRF++GFKE DRVLGGG+VPG+AILIGGNPGAGKSTLLLQT+C L+
Sbjct: 59  AKVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLS 118

Query: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180
            QM TLYVTGEESLQQVAMRA RLGLP  +L MLSET++++IC IAE+E+P++MVIDSIQ
Sbjct: 119 GQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQ 178

Query: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240
           VMH+ADVQSSPGSVAQVRE+A  LTR+AK   VA+ +VGHVTKDG+LAGPKVLEH IDCS
Sbjct: 179 VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCS 238

Query: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300
           +LLDGD DSRFRTLRSHKNRFGAVNELGVFAMT QG+REVSNPSAIFLSRG+E TSGSSV
Sbjct: 239 ILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSV 298

Query: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360
           MVVWEGTRPLLVEIQALVD+S +ANPRRVAVGLEQNRL++LLAVLH+HGGLQMADQDVFV
Sbjct: 299 MVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFV 358

Query: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420
           NVVGGVKVTETSADLALL+A++SS RDRPLP+D+VVFGEVGLAGEIRPVPSGQER++EA 
Sbjct: 359 NVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAF 418

Query: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL 460
           KHGF++AIVP AN+PK   EGMQI GVKKLSDA++ FD+L
Sbjct: 419 KHGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDEL 458