Pairwise Alignments

Query, 460 a.a., DNA repair protein RadA from Escherichia coli HS(pFamp)R (ATCC 700891)

Subject, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

 Score =  382 bits (981), Expect = e-110
 Identities = 211/437 (48%), Positives = 287/437 (65%), Gaps = 17/437 (3%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV 60
           MAK   R FVC  CGA YPRW G+C AC  WN+I E     +P  A  +  +G  G    
Sbjct: 1   MAKNAPR-FVCQACGAVYPRWMGRCEACGEWNSIAE----EAPAEALPKGQTGGRGG--- 52

Query: 61  AKVQKLSDISLEEL----PRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTL 116
              Q+LS +SLE +    PR  TG  E DRV GGG+V GSA+LIGG+PG GKSTLLLQ +
Sbjct: 53  ---QRLSFVSLEGVGAPPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAV 109

Query: 117 CKLAQQ-MKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEE-EQPKLM 174
             LA+   +++Y++GEE++ QV +RA RLGL    +++ + TS+  I    +  E P ++
Sbjct: 110 AGLARGGARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVV 169

Query: 175 VIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLE 234
           VIDSIQ M++  + S+PG+VAQVR  +  L R AK RG  + +VGHVTK+G +AGP+V+E
Sbjct: 170 VIDSIQTMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVME 229

Query: 235 HCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEV 294
           H +D  +  +G+    FR LR+ KNRFGA +E+GVF M++ GL EV NPSA+FL+     
Sbjct: 230 HMVDAVIYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGN 289

Query: 295 TSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMA 354
            +GS V    EGTRP+LVEIQALV  S   + RR  VG +  RLA+++AVL    GL + 
Sbjct: 290 VTGSCVFAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALG 349

Query: 355 DQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQE 414
             DV++NV GG+++ E +ADLA+  A+VSS    P+P D+VVFGE+GL+GEIR V  G  
Sbjct: 350 GNDVYLNVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDT 409

Query: 415 RISEAAKHGFRRAIVPA 431
           R+ EAAK GF +A++PA
Sbjct: 410 RLKEAAKLGFDQALMPA 426